Request to make run name in output files from dorado demux an option

[wshropshire]

Hello,

Is there a way that for >=0.8.1 dorado basecallers that the appending of run-name on dorado demux fastq files be an option? I have a custom script that is identifying fastq files based off of sample sheet and this breaks downstream processing. I can use a sed function if necessary, but having this as an option would be great....

Thanks!

Will

[HalfPhoton]

Hi @wshropshire,
We'll discuss adding this as a feature.

Similar issues to add more context: #1077 #1026

Kind regards,
Rich

[sklages]

@wshropshire @HalfPhoton - yes, having this as an option is the far more better better way. For now I need to fix some workflows/scripts ..