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Add a final summary table of stats

Status: Open.

#155 In nf-core/genomeqc;

· chriswyatt1 opened on Jul 18, 2025

Some modules need conda environments

enhancementNew feature or requestNew feature or request

Status: Open.

#152 In nf-core/genomeqc;

· FernandoDuarteF opened on Jul 8, 2025

Quast to get GC contig of each contig/chromosome

Status: Open.

#147 In nf-core/genomeqc;

· chriswyatt1 opened on Apr 15, 2025

Check if genome contains mitochondrion

Status: Open.

#146 In nf-core/genomeqc;

· chriswyatt1 opened on Apr 15, 2025

Error/Warning messages

Status: Open.

#145 In nf-core/genomeqc;

· FernandoDuarteF opened on Apr 14, 2025

TIDK apriori input options

Status: Open.

#143 In nf-core/genomeqc;

· chriswyatt1 opened on Apr 11, 2025

Decide which programs will be summarised in final tree (annotation mode)

Status: Open.

#142 In nf-core/genomeqc;

· chriswyatt1 opened on Apr 11, 2025

Add a custom tree for genomeonly mode

Status: Open.

#141 In nf-core/genomeqc;

· chriswyatt1 opened on Apr 11, 2025

Genome only mode need more memory

Status: Open.

#140 In nf-core/genomeqc;

· chriswyatt1 opened on Apr 10, 2025

Only allow val(meta), path() as output channels

Status: Open.

#139 In nf-core/genomeqc;

· FernandoDuarteF opened on Apr 8, 2025

Change <code>refseq</code> field to <code>ncbi</code>

Status: Open.

#138 In nf-core/genomeqc;

· FernandoDuarteF opened on Apr 8, 2025

Add FASTQC

Status: Open.

#137 In nf-core/genomeqc;

· FernandoDuarteF opened on Apr 8, 2025