No default behavior NCBI genome info

[geweaa]

Description of the bug

When running magmap while providing indexes (e.g. gtdb-rs214-k31.sbt.zip), I had to manually download both NCBI reference files (assembly_summary_genbank.txt and assembly_summary_refseq.txt) and point to them using ncbi_genome_infos: './ncbi_genome_infos.csv' .

The pipeline stopped when running the pipeline without providing the above mentioned text file.

nf-core/magmap: v1.0.0-g36313b8
Nextflow: 24.10.6

Command used and terminal output

Relevant files

No response

System information

No response