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new module: vizgenpostprocessing/compiletilesegmentation

new moduleAdding a new moduleAdding a new module

Status: Open.

#8802 In nf-core/modules;

· mcmero opened on Jul 23, 2025

new module: biomformat/convert

new moduleAdding a new moduleAdding a new module

Status: Open.

#8800 In nf-core/modules;

· jcbioinformatics opened on Jul 22, 2025

update module: mobster

update module

Status: Open.

#8792 In nf-core/modules;

· elena-buscaroli opened on Jul 21, 2025

GATK4_MUTECT2 fails for gzipped references

bugSomething isn't workingSomething isn't working

good first issueGood for newcomersGood for newcomers

Status: Open.

#8789 In nf-core/modules;

· znorgaard opened on Jul 18, 2025

gprofiler generated GMT does not match the fitlering that the gprofiler website does for GO

bugSomething isn't workingSomething isn't working

Status: Open.

#8786 In nf-core/modules;

· akaviaLab opened on Jul 18, 2025

new module: Parabricks STAR

new moduleAdding a new moduleAdding a new module

Status: Open.

#8785 In nf-core/modules;

· gburnett-nvidia opened on Jul 17, 2025

Typo in ARM profile

bugSomething isn't workingSomething isn't working

Status: Open.

#8783 In nf-core/modules;

· JulianFlesch opened on Jul 16, 2025

User id mismatch when using vscode and devcontainer on Windows 11 with WSL2

bugSomething isn't workingSomething isn't working

Status: Open.

#8769 In nf-core/modules;

· akaviaLab opened on Jul 13, 2025

[FEATURE] Let HIPHASE return the phased bam file

Status: Open.

#8764 In nf-core/modules;

· rollf opened on Jul 9, 2025

Container for FASTQSCREEN_FASTQSCREEN should include bismark

bugSomething isn't workingSomething isn't working

Status: Open.

#8757 In nf-core/modules;

· fbnrst opened on Jul 5, 2025

new module: bascule

new moduleAdding a new moduleAdding a new module

wishlistclosed after a year if no one assignedclosed after a year if no one assigned

Status: Open.

#8750 In nf-core/modules;

· elena-buscaroli opened on Jul 4, 2025

update module: assess adding gawk to coreutils, and re-asses the gawk containers

update module

Status: Open.

#8740 In nf-core/modules;

· nschan opened on Jul 1, 2025