Search results

Exclude entire directories from linting

enhancement

Status: Open.

#3644 In nf-core/tools;

· rrahn opened on Jun 26, 2025

Pipeline linting: check consistency of .nf-core.yml version

command line toolsAnything to do with the cli interfacesAnything to do with the cli interfaces

enhancement

good-first-issue

linting

Status: Open.

#3620 In nf-core/tools;

· mirpedrol opened on Jun 17, 2025

Template: inconsistency between pipeline_test_database_path parameters

bugSomething isn't workingSomething isn't working

Status: Open.

#3614 In nf-core/tools;

· jfy133 opened on Jun 11, 2025

Template: add official place for 'custom' logos

enhancement

Status: Open.

#3613 In nf-core/tools;

· jfy133 opened on Jun 11, 2025

Expand nf-core modules test to allow testing of GPU based modules

enhancement

modulesRelated to tools for working with DSL2 modulesRelated to tools for working with DSL2 modules

nf-test

Status: Open.

Enhancement

#3612 In nf-core/tools;

· famosab opened on Jun 11, 2025

Pipeline linting test <code>pipeline_if_empty_null</code> can be extremely slow in some contexts

bugSomething isn't workingSomething isn't working

linting

Status: Open.

#3605 In nf-core/tools;

· jfy133 opened on Jun 5, 2025

Sort modules conda environment files

linting

modulesRelated to tools for working with DSL2 modulesRelated to tools for working with DSL2 modules

Status: Open.

Enhancement

#3590 In nf-core/tools;

· edmundmiller opened on May 29, 2025

Save SVG originals for logos to repo

enhancement

Status: Open.

#3582 In nf-core/tools;

· erikrikarddaniel opened on May 23, 2025

[FEATURE] Generate README for modules repo automatically to reflect current nf-core/tools version

enhancement

Status: Open.

#3581 In nf-core/tools;

· famosab opened on May 23, 2025

Add linting rule that all processes with a <code>version</code> or <code>versions</code> named output gets added to the <code>ch_versions</code> channel

enhancement

Status: Open.

#3579 In nf-core/tools;

· nh13 opened on May 21, 2025

Capture <code>.nf-core.yml</code> errors and give a useful message

bugSomething isn't workingSomething isn't working

Status: Open.

#3573 In nf-core/tools;

· mirpedrol opened on May 15, 2025

nf-core-bot to update the pipeline snapshots form a comment

enhancement

Status: Open.

#3572 In nf-core/tools;

· mirpedrol opened on May 15, 2025