TYP: Annotate SpatialImage accepting affine=None #1568
Workflow file for this run
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| name: Pre-release checks | |
| # This file tests against pre-release wheels for dependencies | |
| on: | |
| push: | |
| branches: | |
| - master | |
| - maint/* | |
| pull_request: | |
| branches: | |
| - master | |
| - maint/* | |
| schedule: | |
| - cron: '0 0 * * *' | |
| defaults: | |
| run: | |
| shell: bash | |
| concurrency: | |
| group: ${{ github.workflow }}-${{ github.ref }} | |
| cancel-in-progress: true | |
| permissions: | |
| contents: read | |
| jobs: | |
| pre-release: | |
| # Check pre-releases of dependencies on stable Python | |
| runs-on: ${{ matrix.os }} | |
| continue-on-error: true | |
| strategy: | |
| matrix: | |
| os: ['ubuntu-latest', 'windows-latest', 'macos-latest'] | |
| python-version: ["3.9", "3.10", "3.11"] | |
| architecture: ['x64', 'x86'] | |
| install: ['pip'] | |
| check: ['test'] | |
| pip-flags: ['PRE_PIP_FLAGS'] | |
| depends: ['REQUIREMENTS'] | |
| optional-depends: ['DEFAULT_OPT_DEPENDS'] | |
| include: | |
| # Pydicom master | |
| - os: ubuntu-latest | |
| python-version: "3.11" | |
| install: pip | |
| check: test | |
| pip-flags: '' | |
| depends: REQUIREMENTS | |
| optional-depends: PYDICOM_MASTER | |
| exclude: | |
| - os: ubuntu-latest | |
| architecture: x86 | |
| - os: macos-latest | |
| architecture: x86 | |
| env: | |
| DEPENDS: ${{ matrix.depends }} | |
| OPTIONAL_DEPENDS: ${{ matrix.optional-depends }} | |
| INSTALL_TYPE: ${{ matrix.install }} | |
| CHECK_TYPE: ${{ matrix.check }} | |
| EXTRA_PIP_FLAGS: ${{ matrix.pip-flags }} | |
| steps: | |
| - uses: actions/checkout@v3 | |
| with: | |
| submodules: recursive | |
| fetch-depth: 0 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v4 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| architecture: ${{ matrix.architecture }} | |
| - name: Display Python version | |
| run: python -c "import sys; print(sys.version)" | |
| - name: Create virtual environment | |
| run: tools/ci/create_venv.sh | |
| - name: Build archive | |
| run: | | |
| source tools/ci/build_archive.sh | |
| echo "ARCHIVE=$ARCHIVE" >> $GITHUB_ENV | |
| - name: Install dependencies | |
| run: tools/ci/install_dependencies.sh | |
| - name: Install NiBabel | |
| run: tools/ci/install.sh | |
| - name: Run tests | |
| run: tools/ci/check.sh | |
| if: ${{ matrix.check != 'skiptests' }} | |
| - uses: codecov/codecov-action@v3 | |
| if: ${{ always() }} | |
| with: | |
| files: cov.xml | |
| - name: Upload pytest test results | |
| uses: actions/upload-artifact@v3 | |
| with: | |
| name: pytest-results-${{ matrix.os }}-${{ matrix.python-version }} | |
| path: for_testing/test-results.xml | |
| if: ${{ always() && matrix.check == 'test' }} |