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  1. hodcroftlab/EVclades hodcroftlab/EVclades Public

    EVclades is an Enterovirus-adapted version of Art Poon’s fluclades pipeline for automated clade assignment.

    Jupyter Notebook

  2. hodcroftlab/evd68-converter hodcroftlab/evd68-converter Public

    JavaScript

  3. enterovirus-phylo/nextclade_d68 enterovirus-phylo/nextclade_d68 Public

    Snakemake pipeline for creating a Nextclade dataset for Enterovirus D68

    Python

  4. hodcroftlab/template_nextstrain hodcroftlab/template_nextstrain Public template

    Template for building your own Nextstrain workflow

    Python