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    56 repositories

    • CounterMarking.jl

      Public
      Analyze images from countermarking experiments
      Julia
      •
      MIT License
      •0•0•0•0•Updated Jun 4, 2025Jun 4, 2025

    • HolyLabRegistry

      Public
      Julia package registry for the Holy lab at Washington University in St. Louis
      Julia
      •4•17•5•0•Updated May 23, 2025May 23, 2025

    • GPCRAnalysis.jl

      Public
      Routines for analysis of protein structures
      Julia
      •
      MIT License
      •1•7•0•2•Updated May 18, 2025May 18, 2025

    • RegisterHindsight.jl

      Public
      This package is separated from BlockRegistraton.
      Julia
      •0•0•0•1•Updated May 18, 2025May 18, 2025

    • RegisterOptimize.jl

      Public
      This package is separated from BlockRegistraton.
      Julia
      •1•3•2•2•Updated May 18, 2025May 18, 2025

    • RegisterDeformation.jl

      Public
      Representation of spatial deformations
      Julia
      •
      Other
      •4•7•1•1•Updated May 18, 2025May 18, 2025

    • FlyThroughPaths.jl

      Public
      Create "fly-throughs" in 3d visualization
      Julia
      •
      MIT License
      •1•12•6•2•Updated May 3, 2025May 3, 2025

    • GsvdInitialization.jl

      Public
      Discovery of "missing" directions in nonnegative matrix factorization
      Julia
      •
      MIT License
      •0•2•0•2•Updated Apr 24, 2025Apr 24, 2025

    • ThickNumbers.jl

      Public
      Abstract type and utility functions for numbers that also act like sets/intervals
      Julia
      •
      MIT License
      •0•9•0•1•Updated Apr 21, 2025Apr 21, 2025

    • GaussianRandomVariables.jl

      Public
      Math (second-order accuracy) with random variables
      Julia
      •
      MIT License
      •0•5•1•1•Updated Apr 18, 2025Apr 18, 2025

    • NMFMerge.jl

      Public
      Merging components in nonnegative matrix factorization
      Julia
      •
      MIT License
      •0•4•1•1•Updated Apr 16, 2025Apr 16, 2025

    • ZWarpedArrays.jl

      Public
      An image array type for which each 2D slice can (lazily) undergo a different affine coordinate transformation
      Julia
      •
      Other
      •0•4•0•1•Updated Mar 3, 2025Mar 3, 2025

    • CachedArrays.jl

      Public
      Arrays that cache elements in leading dimensions
      Julia
      •
      Other
      •1•4•0•0•Updated Mar 3, 2025Mar 3, 2025

    • ImageInterpLast.jl

      Public
      Lazy interpolation of images along the last dimension (usually time)
      Julia
      •
      Other
      •0•1•0•0•Updated Mar 3, 2025Mar 3, 2025

    • RegisterQD.jl

      Public
      Image registration with the QuadDIRECT optimization algorithm
      Julia
      •
      Other
      •6•14•4•0•Updated Mar 3, 2025Mar 3, 2025

    • ExtractPSF.jl

      Public
      Find point emitters in images and extract point spread functions
      Julia
      •
      Other
      •0•2•0•0•Updated Mar 3, 2025Mar 3, 2025

    • Autosampler.jl

      Public
      Code for interfacing Imagine with stimulus delivery
      Julia
      •
      MIT License
      •0•0•1•1•Updated Mar 3, 2025Mar 3, 2025

    • WarpedImageSeries.jl

      Public
      Lazy warping of a series (usually timeseries) of images
      Julia
      •
      Other
      •0•1•0•0•Updated Mar 3, 2025Mar 3, 2025

    • EcoTrialStructure.jl

      Public
      Data import for experiments on neuroeconomic decision-making
      Julia
      •
      MIT License
      •0•1•0•1•Updated Mar 3, 2025Mar 3, 2025

    • FastScanning.jl

      Public
      Determine camera/laser timing during fast OCPI acquisitions based on measured hardware responses.
      Julia
      •
      Other
      •0•4•0•0•Updated Mar 3, 2025Mar 3, 2025

    • Diffusion.jl

      Public
      Simulations of diffusion on the disc with boundary conditons
      Julia
      •
      MIT License
      •0•1•0•0•Updated Mar 3, 2025Mar 3, 2025

    • OlfactoryTopographicBehavior.jl

      Public
      Utilities for analysis of behavioral experiments on topographic olfaction
      Julia
      •
      MIT License
      •0•0•0•5•Updated Mar 3, 2025Mar 3, 2025

    • ImagineAnalyses.jl

      Public
      A collection of analyses to run on Imagine signals and images.
      Julia
      •
      Other
      •0•0•0•0•Updated Mar 3, 2025Mar 3, 2025

    • RegisterUtilities.jl

      Public
      This package is separated from BlockRegistraton
      Julia
      •
      Other
      •0•0•0•0•Updated Mar 3, 2025Mar 3, 2025

    • RegisterMismatchCommon.jl

      Public
      This package is separated from BlockRegistraton.
      Julia
      •
      Other
      •0•0•0•0•Updated Mar 3, 2025Mar 3, 2025

    • StitchDPI.jl

      Public
      Align and stitch pairs of images acquired with a split field of view
      Julia
      •
      Other
      •0•1•0•1•Updated Mar 3, 2025Mar 3, 2025

    • PiezoSerial.jl

      Public
      Control piezoelectric actuators via serial commands
      Julia
      •
      Other
      •0•0•0•0•Updated Mar 3, 2025Mar 3, 2025

    • InterleavedImages.jl

      Public
      Lazy interleaving of images (arrays) along a chosen dimension
      Julia
      •
      Other
      •0•2•0•0•Updated Mar 3, 2025Mar 3, 2025

    • LinearKernelModels.jl

      Public
      Fitting multi-kernel linear models to data
      Julia
      •
      Other
      •0•0•0•0•Updated Mar 3, 2025Mar 3, 2025

    • RegisterFit.jl

      Public
      RegisterFit contains a number of functions that calculate affine transformations that minimize mismatch. This package is separated from BlockRegistraton
      Julia
      •1•0•1•0•Updated Mar 3, 2025Mar 3, 2025