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    87 repositories

    • git-drs

      Public
      Go
      •1•1•15•4•Updated Jul 11, 2025Jul 11, 2025

    • grip-benchmark

      Public
      Python
      •0•0•0•0•Updated Jul 10, 2025Jul 10, 2025

    • benchtop

      Public
      Go
      •0•0•0•2•Updated Jul 10, 2025Jul 10, 2025

    • grip-graphql

      Public
      A collection of go plugins used for connecting a Grip server to the Gen3 software stack
      Go
      •0•2•1•1•Updated Jul 7, 2025Jul 7, 2025

    • grip

      Public
      Graph Integration Platform
      golangmongodbgraphdbbadger
      Go
      •
      MIT License
      •8•26•19•7•Updated Jul 7, 2025Jul 7, 2025

    • fhirizer

      Public
      Transforms and harmonizes data from Genomic Data Commons (GDC), Cellosaurus cell-lines, International Cancer Genome Consortium (ICGC), and Human Tumor Atlas Network (HTAN) repositories into 🔥 FHIR (Fast Healthcare Interoperability Resources) format.
      Python
      •0•0•20•1•Updated Jul 2, 2025Jul 2, 2025

    • iceberg-schema-tools

      Public
      Create and maintain central iceberg schema.
      Python
      •0•2•7•2•Updated Jun 30, 2025Jun 30, 2025

    • .github

      Public
      0•0•0•0•Updated May 22, 2025May 22, 2025

    • jsonschemagraph

      Public
      Validate and generate graphs from data using JSON Schema Extension
      Go
      •0•0•1•0•Updated May 15, 2025May 15, 2025

    • tractor

      Public
      Airflow based builds
      Python
      •
      MIT License
      •0•0•1•6•Updated Apr 10, 2025Apr 10, 2025

    • hnsw-index

      Public
      Go
      •0•0•0•0•Updated Mar 20, 2025Mar 20, 2025

    • iceberg

      Public
      A clearinghouse for schemas "There is seven-eighths of it underwater for every part that shows."
      MIT License
      •0•2•0•1•Updated Feb 4, 2025Feb 4, 2025

    • sifter

      Public
      ETL Platform for building JSON schema based data and property graphs
      HTML
      •1•3•1•1•Updated Jan 27, 2025Jan 27, 2025

    • deployment

      Public
      BMEG site setup and deployment
      Io
      •1•0•6•1•Updated Dec 11, 2024Dec 11, 2024

    • bmeg-site

      Public
      JavaScript
      •3•0•0•46•Updated Dec 11, 2024Dec 11, 2024

    • jsonschema

      Public
      JSONSchema (draft 2020-12, draft 2019-09, draft-7, draft-6, draft-4) Validation using Go
      Go
      •
      Apache License 2.0
      •115•0•0•0•Updated Nov 11, 2024Nov 11, 2024

    • bmeg-etl

      Public
      ETL configuration for BMEG
      Python
      •2•2•23•2•Updated Oct 21, 2024Oct 21, 2024

    • lathe

      Public
      Go
      •0•1•1•1•Updated Oct 16, 2024Oct 16, 2024

    • grip-endpoints

      Public archive
      A collection of plugins for Reading/Writing to Grip. Oriented towards conforming with iceberg/gen3 schema.
      Go
      •
      MIT License
      •0•0•1•0•Updated Jul 30, 2024Jul 30, 2024

    • fhir_curl

      Public
      CLI for FHIR servers, sends same query to multiple servers, and merges the results.
      Python
      •0•0•0•0•Updated May 2, 2024May 2, 2024

    • flame

      Public
      Go
      •0•0•0•0•Updated Dec 28, 2023Dec 28, 2023

    • goatee

      Public
      Go
      •0•0•0•0•Updated May 12, 2023May 12, 2023

    • cwltool

      Public
      Common Workflow Language reference implementation
      Python
      •
      Apache License 2.0
      •233•0•0•0•Updated Mar 6, 2023Mar 6, 2023

    • gpython

      Public
      gpython is a python interpreter written in go "batteries not included"
      Go
      •
      BSD 3-Clause "New" or "Revised" License
      •97•0•0•0•Updated Jan 18, 2023Jan 18, 2023

    • fhir.resources

      Public
      FHIR Resources https://www.hl7.org/fhir/resourcelist.html
      Python
      •
      Other
      •116•0•0•0•Updated Jan 14, 2023Jan 14, 2023

    • protoc-gen-grpc-http-client

      Public
      Go
      •0•0•0•0•Updated Nov 21, 2022Nov 21, 2022

    • protoc-gen-grpc-rest-direct

      Public
      Go
      •0•0•0•0•Updated Nov 18, 2022Nov 18, 2022

    • client-py

      Public
      Python SMART on FHIR client
      Python
      •
      Other
      •221•0•0•0•Updated Oct 27, 2022Oct 27, 2022

    • pfb_fhir

      Public
      Render a PFB graph from FHIR data
      Python
      •
      Apache License 2.0
      •1•2•1•0•Updated Oct 11, 2022Oct 11, 2022

    • bmeg-dictionary

      Public
      Gen3 Generic Data dictionary
      Python
      •
      Apache License 2.0
      •37•0•0•0•Updated Jul 6, 2022Jul 6, 2022