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    219 repositories

    • dan-lab-to-nwb

      Public
      Python
      •
      MIT License
      •0•0•1•1•Updated Jan 23, 2026Jan 23, 2026

    • ndx-spikesorting

      Public
      NWB extension to store spike sorting outputs and extensions
      Python
      •
      MIT License
      •0•0•0•1•Updated Jan 22, 2026Jan 22, 2026

    • turner-lab-to-nwb

      Public
      NWB Conversion project for the Turner lab at the University of Pittsburgh.
      Python
      •
      MIT License
      •0•0•3•1•Updated Jan 22, 2026Jan 22, 2026

    • schneider-lab-to-nwb

      Public
      Jupyter Notebook
      •
      MIT License
      •1•0•1•7•Updated Jan 22, 2026Jan 22, 2026

    • neuroconv

      Public
      Create NWB files by converting and combining neural data in proprietary formats and adding essential metadata.
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •33•71•111•21•Updated Jan 22, 2026Jan 22, 2026

    • ndx-fiber-photometry

      Public
      This is an NWB extension for storing fiber photometry recordings and associated metadata.
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •0•3•1•1•Updated Jan 22, 2026Jan 22, 2026

    • ndx-anatomical-localization

      Public
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •2•1•4•2•Updated Jan 22, 2026Jan 22, 2026

    • woodcode

      Public
      A python package for neural data analysis in Wood/Dudchenko lab
      Jupyter Notebook
      •
      GNU General Public License v3.0
      •2•0•0•1•Updated Jan 20, 2026Jan 20, 2026

    • IBL-widefield-to-nwb

      Public
      NWB Conversion project for the IBL widefield dataset
      Python
      •
      MIT License
      •0•0•6•2•Updated Jan 19, 2026Jan 19, 2026

    • roiextractors

      Public
      Python-based module for extracting from, converting between, and handling optical imaging data from several file formats. Inspired by SpikeInterface.
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •11•15•26•9•Updated Jan 19, 2026Jan 19, 2026

    • IBL-to-nwb

      Public
      Conversion of IBL data to NWB format.
      nwb-conversion
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •6•3•9•3•Updated Jan 19, 2026Jan 19, 2026

    • ndx-ibl

      Public
      Custom extension for special IBL neurodata types. Used in the ibl-lab-to-nwb project.
      ndx
      Python
      •
      Other
      •0•0•0•0•Updated Jan 15, 2026Jan 15, 2026

    • pagan-lab-to-nwb

      Public
      NWB Conversion project for the Pagan lab.
      Jupyter Notebook
      •
      MIT License
      •0•0•1•1•Updated Jan 15, 2026Jan 15, 2026

    • kind-lab-to-nwb

      Public
      NWB Conversion project for the Kind lab.
      Jupyter Notebook
      •
      MIT License
      •2•1•5•1•Updated Jan 15, 2026Jan 15, 2026

    • spikeinterface

      Public
      A Python-based module for creating flexible and robust spike sorting pipelines.
      Python
      •
      MIT License
      •241•2•0•0•Updated Jan 15, 2026Jan 15, 2026

    • dandi-access-vis

      Public
      Python
      •1•0•0•1•Updated Jan 15, 2026Jan 15, 2026

    • IBL-mesoscope-to-nwb

      Public
      NWB Conversion project for IBL mesoscope dataset
      Jupyter Notebook
      •
      MIT License
      •0•0•1•1•Updated Jan 12, 2026Jan 12, 2026

    • catalystneuro.github.io

      Public
      TypeScript
      •0•0•0•7•Updated Jan 9, 2026Jan 9, 2026

    • staged-extensions

      Public
      A place to submit NWB Extensions for registration in the official NDX Catalog
      Other
      •24•0•0•0•Updated Jan 8, 2026Jan 8, 2026

    • schwerdt-lab-to-nwb

      Public
      NWB Conversion project for the Schwerdt lab at University of Pittsburgh.
      Jupyter Notebook
      •
      MIT License
      •0•0•2•2•Updated Jan 8, 2026Jan 8, 2026

    • example-notebooks

      Public
      Jupyter Notebook
      •
      Apache License 2.0
      •17•0•0•0•Updated Jan 7, 2026Jan 7, 2026

    • find_reuse

      Public
      Python
      •1•1•0•0•Updated Jan 6, 2026Jan 6, 2026

    • lazyslice

      Public
      Lazy transposing and slicing of h5py and Zarr Datasets
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •3•3•3•1•Updated Dec 23, 2025Dec 23, 2025

    • .github

      Public
      Company-wide documentation of practices, protocols, policies, and processes.
      0•0•1•0•Updated Dec 23, 2025Dec 23, 2025

    • ndx-spatial-transformation

      Public
      NWB extension for storing spatial landmarks and spatial transformations in neuroimaging data. Enables standardized representation of anatomical landmarks with their pixel coordinates in both original and registered image spaces, along with the associated rotation, translation, and scaling parameters used for spatial registration.
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •0•0•0•0•Updated Dec 17, 2025Dec 17, 2025

    • ndx-microscopy

      Public
      An enhancement to core NWB schema types related to microscopy data.
      Python
      •
      MIT License
      •0•0•9•4•Updated Dec 3, 2025Dec 3, 2025

    • ndx-ophys-devices

      Public
      This is an NWB extension for storing metadata of devices used in optical experimental setup (microscopy, fiber photometry, optogenetic stimulation etc.)
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •1•1•1•1•Updated Dec 3, 2025Dec 3, 2025

    • mcp

      Public
      CatalystNeuro MCP servers
      Python
      •
      MIT License
      •0•1•2•3•Updated Dec 2, 2025Dec 2, 2025

    • dandi-docusaurus-example

      Public
      example of website using docusaurus
      TypeScript
      •
      MIT License
      •0•0•0•6•Updated Dec 2, 2025Dec 2, 2025

    • hnasko-lab-to-nwb

      Public
      NWB Conversion project for the Hnasko Lab
      Jupyter Notebook
      •
      MIT License
      •0•0•1•1•Updated Nov 24, 2025Nov 24, 2025