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    • Status for all LINC services
      Markdown
      1000Updated Dec 17, 2025Dec 17, 2025
    • Data conversion scripts for the LINC project
      Python
      31245Updated Dec 16, 2025Dec 16, 2025
    • python script to convert trk files to precomputed annoation directory
      Python
      0001Updated Dec 10, 2025Dec 10, 2025
    • LINC Gallery
      MDX
      1011Updated Dec 9, 2025Dec 9, 2025
    • LINC Dashboard
      Python
      1030Updated Dec 1, 2025Dec 1, 2025
    • linc-docs

      Public
      LINC Documentation
      5171Updated Nov 19, 2025Nov 19, 2025
    • Code for the paper "Fully Automated Segmentation of Fiber Bundles in Anatomic Tracing Data"
      Python
      2100Updated Oct 9, 2025Oct 9, 2025
    • linc-archive

      Public
      LINC API server and Web app
      Python
      170110Updated Jul 25, 2025Jul 25, 2025
    • sandbox-dandi-archive

      Public archive
      DANDI API server and Web app
      Python
      17000Updated Jul 23, 2025Jul 23, 2025
    • neuroglancer

      Public
      WebGL-based viewer for volumetric data
      TypeScript
      336118Updated Jun 3, 2025Jun 3, 2025
    • LINC Archive Infrastructure
      HCL
      8001Updated May 27, 2025May 27, 2025
    • Visualize, share and annotate your large 3D images online
      TypeScript
      30033Updated May 3, 2025May 3, 2025
    • Fibers.jl

      Public
      Julia package for reconstructing fiber trajectories from multi-scale, multi-modal imaging data
      Julia
      41921Updated Apr 24, 2025Apr 24, 2025
    • niivue

      Public
      a WebGL2 based medical image viewer. Supports over 30 formats of volumes and meshes.
      TypeScript
      99001Updated Apr 24, 2025Apr 24, 2025
    • Python
      3110Updated Apr 2, 2025Apr 2, 2025
    • handbook

      Public archive
      Handbook for interacting with the DANDI archive.
      HTML
      18000Updated Feb 19, 2025Feb 19, 2025
    • Capture issues related to the LINC cloud infrastructure
      1060Updated Feb 6, 2025Feb 6, 2025
    • WebGL-based viewer for volumetric data
      TypeScript
      336000Updated Jan 27, 2025Jan 27, 2025
    • 1002Updated Dec 19, 2024Dec 19, 2024
    • linc-cli

      Public archive
      LINC Client to facilitate common operations
      Python
      33000Updated Nov 19, 2024Nov 19, 2024
    • dandi-cli

      Public archive
      DANDI command line client to facilitate common operations
      Python
      33000Updated Nov 15, 2024Nov 15, 2024
    • Sandbox DANDI infrastructure repository
      HCL
      8000Updated Nov 5, 2024Nov 5, 2024
    • lumin

      Public
      Jupyter Notebook
      0020Updated Aug 9, 2024Aug 9, 2024
    • Coding exercise for LINC interviews
      Python
      5001Updated Jul 1, 2024Jul 1, 2024
    • linc-hub

      Public archive
      Infrastructure and code for the dandihub
      Jinja
      25000Updated Jun 10, 2024Jun 10, 2024
    • NeuroTrALE-ui

      Public archive
      WebGL-based viewer for volumetric data
      TypeScript
      336100Updated May 29, 2024May 29, 2024
    • Top-level image processing streams for LINC data
      Shell
      3031Updated May 8, 2024May 8, 2024
    • A repository to collect docs/issues on DANDI project infrastructure
      HCL
      8000Updated Mar 25, 2024Mar 25, 2024
    • dandi-schema

      Public archive
      Schemata for DANDI archive project
      Python
      15000Updated Mar 14, 2024Mar 14, 2024
    • Reimplementation of SynthMorph in PyTorch
      Python
      1000Updated Feb 7, 2024Feb 7, 2024