Repositories list

• silica-np-synthesis

  Public
  Jupyter Notebook

  •

  MIT License

  •0•0•0•0•Updated Feb 13, 2025Feb 13, 2025

• MC-DFM

  Public
  The Monte Carlo Distribution Function Method (MC-DFM) is applied to model the small angle scattering curves of large biomolecular assemblies.

  Jupyter Notebook

  •

  MIT License

  •0•2•0•0•Updated Feb 5, 2025Feb 5, 2025

• papers

  Public
  Collection of codes for reproducibility from published research

  Jupyter Notebook

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  GNU General Public License v3.0

  •0•3•1•2•Updated Jan 28, 2025Jan 28, 2025

• activephasemap

  Public
  Active sampling based strategies for constructing 'phase' maps using spectroscopic measurements

  Python

  •

  GNU General Public License v2.0

  •0•0•0•0•Updated Jan 23, 2025Jan 23, 2025

• digital_pipette_server

  Public
  Python

  •

  Apache License 2.0

  •0•0•0•0•Updated Jan 16, 2025Jan 16, 2025

• saxs_data_processing

  Public
  Tools for processing SAXS data. Mostly geared towards data from Xenocs instrument

  Python

  •

  MIT License

  •0•1•1•0•Updated Dec 17, 2024Dec 17, 2024

• autophasemap

  Public
  Automatic Structure Phase Map (autophasemap) generation

  Jupyter Notebook

  •0•0•0•1•Updated Dec 17, 2024Dec 17, 2024

• Polymer_drop_casting

  Public
  G-code

  •0•0•0•0•Updated Sep 13, 2024Sep 13, 2024

• Automation-Hardware

  Public
  Pozzo Group OT2 Hardware

  Python

  •

  GNU General Public License v3.0

  •0•4•0•0•Updated Aug 15, 2024Aug 15, 2024

• RhuA_SAXS_Modeling

  Public
  Method to simulate the scattering curve of an assembly of RhuA Proteins

  Jupyter Notebook

  •0•0•0•0•Updated Aug 13, 2024Aug 13, 2024

• jubilee_pipette_BOdemo

  Public
  Color matching bayesian optimization with jubilee, rewritten to use pipette

  Jupyter Notebook

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  MIT License

  •1•3•0•0•Updated Aug 5, 2024Aug 5, 2024

• bo-serving

  Public
  Serve Ax bayesian optimization as an endpoint.

  Python

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  Apache License 2.0

  •0•0•0•0•Updated Jul 26, 2024Jul 26, 2024

• OT2_silica_synthesis

  Public
  Protocols for silica synthesis on the OT2

  Python

  •0•0•0•0•Updated Jul 10, 2024Jul 10, 2024

• ML4MS2024_tutorials

  Public
  Tutorial notebooks for the 2024 Machine Learning Modalities for Material Science workshop

  Jupyter Notebook

  •0•1•0•0•Updated May 10, 2024May 10, 2024

• bayesian-optimization-tools

  Public
  Collection of tools to run an off-the-shelf Bayesian optimizations with the current experimental set up in the Pozzo group

  Python

  •

  GNU General Public License v2.0

  •0•0•0•0•Updated May 9, 2024May 9, 2024

• HEAD

  Public
  Supporting code for the "Autonomous retrosynthesis of gold nanoparticles via spectral shape matching" paper. DOI : 10.1039/D2DD00025C

  differential-geometrymaterials-sciencematerials-informatics+ 3bayesian-optimizationself-driving-laboratoriesretrosynthesis

  Jupyter Notebook

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  MIT License

  •2•8•0•1•Updated Apr 9, 2024Apr 9, 2024

• colormixdemo

  Public
  Modular implementation of a color mixing demo. Intended for use with the Jubilee laboratory automation platform.

  Jupyter Notebook

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  MIT License

  •0•0•0•0•Updated Mar 22, 2024Mar 22, 2024

• micelles

  Public
  Form factors ofblock copolymer micelles with spherical, ellipsoidal and cylindrical cores

  Jupyter Notebook

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  GNU General Public License v2.0

  •0•0•0•0•Updated Mar 7, 2024Mar 7, 2024

• MRSFall23

  Public
  This repository contains code and data used for MRS Fall 2023 tutorial

  Jupyter Notebook

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  GNU General Public License v3.0

  •0•0•0•0•Updated Dec 6, 2023Dec 6, 2023

• science_jubilee

  Public
  Controlling Jubilees for Science!

  Python

  •

  MIT License

  •13•0•0•0•Updated Oct 20, 2023Oct 20, 2023

• designspacediscovery

  Public
  Cheminformatics workflow to find new candidate compounds with desired properties

  Python

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  Apache License 2.0

  •0•0•0•0•Updated Aug 30, 2023Aug 30, 2023

• sonication_station

  Public
  Using Jubilee3D for sample preparation with sonication

  Python

  •1•0•0•0•Updated May 31, 2023May 31, 2023

• awesome-self-driving-labs

  Public
  A curated list of self-driving laboratories that combine hardware automation and artificial intelligence to accelerate scientific discovery.

  Creative Commons Zero v1.0 Universal

  •21•0•0•1•Updated May 25, 2023May 25, 2023

• otto

  Public
  Plans and the mixing of reagents where the delay times and order of adding the reagents are design variables. The protocol can then be executed with an OT2 robot.

  Jupyter Notebook

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  MIT License

  •0•0•0•0•Updated Feb 19, 2023Feb 19, 2023

• OT2-DOE

  Public
  Jupyter Notebook

  •

  MIT License

  •1•5•0•0•Updated Nov 19, 2022Nov 19, 2022

• AnalySAS

  Public
  Python

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  MIT License

  •0•0•0•1•Updated Jun 21, 2022Jun 21, 2022

• phasIR

  Public
  Python modules for high-throughput measurement of melting point using IR bolometry

  Python

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  MIT License

  •4•5•0•1•Updated Apr 20, 2022Apr 20, 2022

• des-basis-set

  Public
  Package for determining basis set of DES candidates for high-throughput experimentation

  Jupyter Notebook

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  MIT License

  •1•0•0•0•Updated Feb 16, 2022Feb 16, 2022

• OT2-Course-MSE

  Public
  Course documents and code for introduction to high-throughput experimentation module for MSE

  Jupyter Notebook

  •

  GNU General Public License v3.0

  •0•0•0•0•Updated Jan 25, 2022Jan 25, 2022

• OT2Protocols

  Public
  General Repository for OT2 Design of Experiments

  Jupyter Notebook

  •

  MIT License

  •0•2•3•0•Updated Feb 24, 2021Feb 24, 2021