Repositories list

• OT2-ADT

  Public
  Opentrons OT2 Automated Diffusion Testing

  Jupyter Notebook

  •

  MIT License

  •3•0•0•0•Updated Oct 27, 2025Oct 27, 2025

• gel-reaction-diffusion

  Public
  Investigating reaction diffusion for critical materials separation using hydrogels. Accelerated using the Science-Jubilee platform.

  Jupyter Notebook

  •

  MIT License

  •0•0•0•0•Updated Oct 16, 2025Oct 16, 2025

• jubilee_pipette_BOdemo

  Public
  Color matching bayesian optimization with jubilee, rewritten to use pipette

  Jupyter Notebook

  •

  MIT License

  •1•4•0•0•Updated Oct 8, 2025Oct 8, 2025

• silica_lipid_DNA

  Public
  Jupyter Notebook

  •

  MIT License

  •0•0•0•0•Updated Oct 6, 2025Oct 6, 2025

• bo-serving

  Public
  Serve Ax bayesian optimization as an endpoint.

  Python

  •

  Apache License 2.0

  •0•0•0•0•Updated Oct 3, 2025Oct 3, 2025

• Ball-Mill-Mechanoredox

  Public
  Hardware designs and workbook for HTP ball mill mechanoredox using Science Jubilee

  GNU General Public License v3.0

  •0•0•0•0•Updated Aug 22, 2025Aug 22, 2025

• autophasemap

  Public
  Automatic Structure Phase Map (autophasemap) generation

  Jupyter Notebook

  •0•0•0•0•Updated Aug 22, 2025Aug 22, 2025

• OT2-DOE

  Public
  Jupyter Notebook

  •

  MIT License

  •3•5•0•0•Updated Aug 6, 2025Aug 6, 2025

• automated-mesoporous-silica

  Public
  Jupyter Notebook

  •

  MIT License

  •1•0•0•0•Updated Aug 5, 2025Aug 5, 2025

• theia

  Public
  Python

  •

  MIT License

  •0•0•0•0•Updated Aug 1, 2025Aug 1, 2025

• MC-DFM

  Public
  The Monte Carlo Distribution Function Method (MC-DFM) is applied to model the small angle scattering curves of large biomolecular assemblies.

  Jupyter Notebook

  •

  MIT License

  •0•9•0•0•Updated Jun 25, 2025Jun 25, 2025

• designspacediscovery

  Public
  Cheminformatics workflow to find new candidate compounds with desired properties

  Python

  •

  Apache License 2.0

  •0•0•0•0•Updated Jun 11, 2025Jun 11, 2025

• silica-np-synthesis

  Public
  Jupyter Notebook

  •

  MIT License

  •1•0•0•0•Updated Jun 10, 2025Jun 10, 2025

• Automation-Hardware

  Public
  Pozzo Group OT2 Hardware

  Python

  •

  GNU General Public License v3.0

  •0•5•0•0•Updated Jun 4, 2025Jun 4, 2025

• AFL-sample-loader

  Public
  The automation software that powers the NIST Autonomous Formulation Lab! A flexible, web-based backend for device integration, drivers for some devices we've found useful, and glue that makes the AFL run.

  Python

  •

  Other

  •8•0•0•0•Updated Jun 4, 2025Jun 4, 2025

• saxs_data_processing

  Public
  Tools for processing SAXS data. Mostly geared towards data from Xenocs instrument

  Python

  •

  MIT License

  •0•1•1•0•Updated May 26, 2025May 26, 2025

• digital_pipette_server

  Public
  Python

  •

  Apache License 2.0

  •2•1•0•0•Updated May 2, 2025May 2, 2025

• activephasemap

  Public
  Active sampling based strategies for constructing 'phase' maps using spectroscopic measurements

  Python

  •

  GNU General Public License v2.0

  •0•0•0•0•Updated Apr 28, 2025Apr 28, 2025

• AFL_SAXS_Driver

  Public
  X-ray instrument manager for Jubilee/AFL integration

  0•0•0•0•Updated Feb 28, 2025Feb 28, 2025

• papers

  Public
  Collection of codes for reproducibility from published research

  Jupyter Notebook

  •

  GNU General Public License v3.0

  •0•3•1•2•Updated Jan 28, 2025Jan 28, 2025

• Polymer_drop_casting

  Public
  G-code

  •0•0•0•0•Updated Sep 13, 2024Sep 13, 2024

• RhuA_SAXS_Modeling

  Public
  Method to simulate the scattering curve of an assembly of RhuA Proteins

  Jupyter Notebook

  •0•0•0•0•Updated Aug 13, 2024Aug 13, 2024

• OT2_silica_synthesis

  Public
  Protocols for silica synthesis on the OT2

  Python

  •0•0•0•0•Updated Jul 10, 2024Jul 10, 2024

• ML4MS2024_tutorials

  Public
  Tutorial notebooks for the 2024 Machine Learning Modalities for Material Science workshop

  Jupyter Notebook

  •0•1•0•0•Updated May 10, 2024May 10, 2024

• bayesian-optimization-tools

  Public
  Collection of tools to run an off-the-shelf Bayesian optimizations with the current experimental set up in the Pozzo group

  Python

  •

  GNU General Public License v2.0

  •0•0•0•0•Updated May 9, 2024May 9, 2024

• HEAD

  Public
  Supporting code for the "Autonomous retrosynthesis of gold nanoparticles via spectral shape matching" paper. DOI : 10.1039/D2DD00025C

  differential-geometrymaterials-sciencematerials-informatics+ 3bayesian-optimizationself-driving-laboratoriesretrosynthesis

  Jupyter Notebook

  •

  MIT License

  •2•8•0•1•Updated Apr 9, 2024Apr 9, 2024

• colormixdemo

  Public
  Modular implementation of a color mixing demo. Intended for use with the Jubilee laboratory automation platform.

  Jupyter Notebook

  •

  MIT License

  •0•0•0•0•Updated Mar 22, 2024Mar 22, 2024

• micelles

  Public
  Form factors ofblock copolymer micelles with spherical, ellipsoidal and cylindrical cores

  Jupyter Notebook

  •

  GNU General Public License v2.0

  •0•0•0•0•Updated Mar 7, 2024Mar 7, 2024

• MRSFall23

  Public
  This repository contains code and data used for MRS Fall 2023 tutorial

  Jupyter Notebook

  •

  GNU General Public License v3.0

  •0•0•0•0•Updated Dec 6, 2023Dec 6, 2023

• science_jubilee

  Public
  Controlling Jubilees for Science!

  Python

  •

  MIT License

  •17•0•0•0•Updated Oct 20, 2023Oct 20, 2023