Terms of Use: Academic Research
isabl_cli is a command line client and SDK for the Isabl Platform infrastructure.
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Isabl is a platform for the integration, management, and processing of individual-centric multimodal data. Welcome to the Isabl Documentation!
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Isabl is a plug-and-play data science framework designed to support the processing of multimodal patient-centric data. Have questions? Ask here.
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Isabl has been developed by the Elli Papaemmanuil's Lab at Memorial Sloan Kettering Cancer Center, and it's currently used by multiple scientific groups and contributors.
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Learn more: Isabl documentation.
Medina-MartÃnez, J.S., Arango-Ossa, J.E., Levine, M.F. et al. Isabl Platform, a digital biobank for processing multimodal patient data. BMC Bioinformatics 21, 549 (2020).
https://doi.org/10.1186/s12859-020-03879-7
pip install isabl_cli# Set up your environment variables
export ISABL_API_URL="http://<your-isabl-instance>/api/v1/"
export CLIENT_ID="<your-client-id>"
# Authenticate and cache credentials
isabl login
# See all available commands
isabl --helpContributions are welcome and greatly appreciated, check our contributing guidelines!
isabl is free for academic and research use. For commercial use, please contact us.
Isabl was created at Elli Papaemmanuil's lab.