Update dashBio to v0.4.5 and enable asynchronous component loading (#457

)

DESCRIPTION

@@ -1,15 +1,16 @@
 Package: dashBio
-Title: Dash components for bioinformatics
-Version: 0.1.2
-Authors @R: as.person(c(The Plotly Team <[email protected]>))
-Description: Dash components for bioinformatics
+Title: Open-source Bioinformatics Components for Dash
+Version: 0.4.5
+Description: A suite of components that makes it simpler to analyze and visualize bioinformatics data and interact with them in a Dash application.
 Depends: R (>= 3.0.2), manhattanly
-Imports: dash
-Suggests:
+Imports: dash 
+Suggests: 
 License: MIT + file LICENSE
 URL: https://github.com/plotly/dash-bio
 BugReports: https://github.com/plotly/dash-bio/issues
 Encoding: UTF-8
 LazyData: true
+KeepSource: true
 Author: The Plotly Team [aut]
 Maintainer: Ryan Patrick Kyle <[email protected]>
+RoxygenNote: 6.1.1

NAMESPACE

@@ -1,8 +1,8 @@
-# AUTO GENERATED FILE - DO NOT EDIT
+#AUTO GENERATED FILE - DO NOT EDIT
 
 export(dashbioAlignmentChart)
-export(dashbioAlignmentViewer)
 export(dashbioCircos)
+export(dashbioFornaContainer)
 export(dashbioIdeogram)
 export(dashbioMolecule2dViewer)
 export(dashbioMolecule3dViewer)
@@ -13,5 +13,3 @@ export(dashbioSpeck)
 export(dashbioManhattan)
 export(dashbioVolcano)
 import(manhattanly)
-
-import(dash)

R/dashbioFornaContainer.R

@@ -0,0 +1,18 @@
+# AUTO GENERATED FILE - DO NOT EDIT
+
+dashbioFornaContainer <- function(id=NULL, height=NULL, width=NULL, sequences=NULL, nodeFillColor=NULL, colorScheme=NULL, customColors=NULL, allowPanningAndZooming=NULL) {
+
+    props <- list(id=id, height=height, width=width, sequences=sequences, nodeFillColor=nodeFillColor, colorScheme=colorScheme, customColors=customColors, allowPanningAndZooming=allowPanningAndZooming)
+    if (length(props) > 0) {
+        props <- props[!vapply(props, is.null, logical(1))]
+    }
+    component <- list(
+        props = props,
+        type = 'FornaContainer',
+        namespace = 'dash_bio',
+        propNames = c('id', 'height', 'width', 'sequences', 'nodeFillColor', 'colorScheme', 'customColors', 'allowPanningAndZooming'),
+        package = 'dashBio'
+        )
+
+    structure(component, class = c('dash_component', 'list'))
+}

R/internal.R

@@ -1,26 +1,117 @@
 .dashBio_js_metadata <- function() {
 deps_metadata <- list(`dash_bio` = structure(list(name = "dash_bio",
-version = "0.1.2", src = list(href = NULL,
+version = "0.4.5", src = list(href = NULL,
+file = "deps"), meta = NULL,
+script = 'async~alignment.js',
+stylesheet = NULL, head = NULL, attachment = NULL, package = "dashBio",
+all_files = FALSE, async = TRUE), class = "html_dependency"),
+`dash_bio` = structure(list(name = "dash_bio",
+version = "0.4.5", src = list(href = NULL,
+file = "deps"), meta = NULL,
+script = 'async~circos.js',
+stylesheet = NULL, head = NULL, attachment = NULL, package = "dashBio",
+all_files = FALSE, async = TRUE), class = "html_dependency"),
+`dash_bio` = structure(list(name = "dash_bio",
+version = "0.4.5", src = list(href = NULL,
+file = "deps"), meta = NULL,
+script = 'async~ideogram.js',
+stylesheet = NULL, head = NULL, attachment = NULL, package = "dashBio",
+all_files = FALSE, async = TRUE), class = "html_dependency"),
+`dash_bio` = structure(list(name = "dash_bio",
+version = "0.4.5", src = list(href = NULL,
+file = "deps"), meta = NULL,
+script = 'async~moleculeviewer2.js',
+stylesheet = NULL, head = NULL, attachment = NULL, package = "dashBio",
+all_files = FALSE, async = TRUE), class = "html_dependency"),
+`dash_bio` = structure(list(name = "dash_bio",
+version = "0.4.5", src = list(href = NULL,
+file = "deps"), meta = NULL,
+script = 'async~moleculeviewer3.js',
+stylesheet = NULL, head = NULL, attachment = NULL, package = "dashBio",
+all_files = FALSE, async = TRUE), class = "html_dependency"),
+`dash_bio` = structure(list(name = "dash_bio",
+version = "0.4.5", src = list(href = NULL,
+file = "deps"), meta = NULL,
+script = 'async~needle.js',
+stylesheet = NULL, head = NULL, attachment = NULL, package = "dashBio",
+all_files = FALSE, async = TRUE), class = "html_dependency"),
+`dash_bio` = structure(list(name = "dash_bio",
+version = "0.4.5", src = list(href = NULL,
+file = "deps"), meta = NULL,
+script = 'async~onco.js',
+stylesheet = NULL, head = NULL, attachment = NULL, package = "dashBio",
+all_files = FALSE, async = TRUE), class = "html_dependency"),
+`dash_bio` = structure(list(name = "dash_bio",
+version = "0.4.5", src = list(href = NULL,
+file = "deps"), meta = NULL,
+script = 'async~sequence.js',
+stylesheet = NULL, head = NULL, attachment = NULL, package = "dashBio",
+all_files = FALSE, async = TRUE), class = "html_dependency"),
+`dash_bio` = structure(list(name = "dash_bio",
+version = "0.4.5", src = list(href = NULL,
+file = "deps"), meta = NULL,
+script = 'async~speck.js',
+stylesheet = NULL, head = NULL, attachment = NULL, package = "dashBio",
+all_files = FALSE, async = TRUE), class = "html_dependency"),
+`dash_bio` = structure(list(name = "dash_bio",
+version = "0.4.5", src = list(href = NULL,
+file = "deps"), meta = NULL,
+script = 'async~alignment.js.map',
+stylesheet = NULL, head = NULL, attachment = NULL, package = "dashBio",
+all_files = FALSE, dynamic = TRUE), class = "html_dependency"),
+`dash_bio` = structure(list(name = "dash_bio",
+version = "0.4.5", src = list(href = NULL,
+file = "deps"), meta = NULL,
+script = 'async~circos.js.map',
+stylesheet = NULL, head = NULL, attachment = NULL, package = "dashBio",
+all_files = FALSE, dynamic = TRUE), class = "html_dependency"),
+`dash_bio` = structure(list(name = "dash_bio",
+version = "0.4.5", src = list(href = NULL,
+file = "deps"), meta = NULL,
+script = 'async~ideogram.js.map',
+stylesheet = NULL, head = NULL, attachment = NULL, package = "dashBio",
+all_files = FALSE, dynamic = TRUE), class = "html_dependency"),
+`dash_bio` = structure(list(name = "dash_bio",
+version = "0.4.5", src = list(href = NULL,
+file = "deps"), meta = NULL,
+script = 'async~moleculeviewer2.js.map',
+stylesheet = NULL, head = NULL, attachment = NULL, package = "dashBio",
+all_files = FALSE, dynamic = TRUE), class = "html_dependency"),
+`dash_bio` = structure(list(name = "dash_bio",
+version = "0.4.5", src = list(href = NULL,
+file = "deps"), meta = NULL,
+script = 'async~moleculeviewer3.js.map',
+stylesheet = NULL, head = NULL, attachment = NULL, package = "dashBio",
+all_files = FALSE, dynamic = TRUE), class = "html_dependency"),
+`dash_bio` = structure(list(name = "dash_bio",
+version = "0.4.5", src = list(href = NULL,
+file = "deps"), meta = NULL,
+script = 'async~needle.js.map',
+stylesheet = NULL, head = NULL, attachment = NULL, package = "dashBio",
+all_files = FALSE, dynamic = TRUE), class = "html_dependency"),
+`dash_bio` = structure(list(name = "dash_bio",
+version = "0.4.5", src = list(href = NULL,
+file = "deps"), meta = NULL,
+script = 'async~onco.js.map',
+stylesheet = NULL, head = NULL, attachment = NULL, package = "dashBio",
+all_files = FALSE, dynamic = TRUE), class = "html_dependency"),
+`dash_bio` = structure(list(name = "dash_bio",
+version = "0.4.5", src = list(href = NULL,
+file = "deps"), meta = NULL,
+script = 'async~sequence.js.map',
+stylesheet = NULL, head = NULL, attachment = NULL, package = "dashBio",
+all_files = FALSE, dynamic = TRUE), class = "html_dependency"),
+`dash_bio` = structure(list(name = "dash_bio",
+version = "0.4.5", src = list(href = NULL,
+file = "deps"), meta = NULL,
+script = 'async~speck.js.map',
+stylesheet = NULL, head = NULL, attachment = NULL, package = "dashBio",
+all_files = FALSE, dynamic = TRUE), class = "html_dependency"),
+`dash_bio` = structure(list(name = "dash_bio",
+version = "0.4.5", src = list(href = NULL,
 file = "deps"), meta = NULL,
 script = 'bundle.js',
 stylesheet = NULL, head = NULL, attachment = NULL, package = "dashBio",
 all_files = FALSE), class = "html_dependency"))
 return(deps_metadata)
 }
-
-dash_assert_valid_wildcards <- function (attrib = list("data", "aria"), ...)
-{
-    args <- list(...)
-    validation_results <- lapply(names(args), function(x) {
-        grepl(paste0("^", attrib, "-[a-zA-Z0-9]{1,}$", collapse = "|"),
-            x)
-    })
-    if (FALSE %in% validation_results) {
-        stop(sprintf("The following wildcards are not currently valid in Dash: '%s'",
-            paste(names(args)[grepl(FALSE, unlist(validation_results))],
-                collapse = ", ")), call. = FALSE)
-    }
-    else {
-        return(args)
-    }
-}

dash-info.yaml

@@ -1,6 +1,6 @@
-pkg_help_description: >
-    Dash Bio is a suite of bioinformatics components that make it simpler to analyze and visualize bioinformatics data and interact with them in a Dash application.
-pkg_help_title: >
+pkg_help_description: >-
+    A suite of components that makes it simpler to analyze and visualize bioinformatics data and interact with them in a Dash application.
+pkg_help_title: >-
     Open-source Bioinformatics Components for Dash
 
 r_examples: