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Add micro simulation input file as a configuration option #182

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Add micro simulation input file as a configuration option #182

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11 changes: 11 additions & 0 deletions micro_manager/config.py
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Original file line number Diff line number Diff line change
Expand Up @@ -25,6 +25,7 @@ def __init__(self, config_file_name):
self._config_file_name = config_file_name
self._logger = None
self._micro_file_name = None
self._micro_sim_config_file_name = None

self._precice_config_file_name = None
self._macro_mesh_name = None
Expand Down Expand Up @@ -109,6 +110,16 @@ def _read_json(self, config_file_name):
"Micro simulation file name: " + self._data["micro_file_name"]
)

try:
self._micro_sim_config_file_name = self._data["micro_sim_config_file_name"]
self._logger.log_info_rank_zero(
"Micro simulation config file name: " + self._micro_sim_config_file_name
)
except BaseException:
self._logger.log_info_rank_zero(
"No micro simulation config file name provided. Micro Manager assumes that the name is hardcoded in the micro simulation file."
)

try:
self._output_dir = self._data["output_directory"]
self._logger.log_info_rank_zero(
Expand Down