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Pull requests: prody/ProDy

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Pull requests list

Fix for parsing CIF files with atoms to the end, like those from PyMOL
#2183 opened Oct 31, 2025 by jamesmkrieger Loading…
New hinge identification method
#2179 opened Oct 9, 2025 by stoneandbone Loading…
@vbadwaj
8
add option increment_ter so can be False
#2177 opened Sep 16, 2025 by jamesmkrieger Loading…
@vbadwaj
Incorporating DruGUI into ProDy
#2171 opened Aug 21, 2025 by Cventura18 Loading…
@AnthonyBogetti @vbadwaj
@anupam-banerjee @Cventura18
12
a more generalized solution for cif parsing
#2165 opened Aug 19, 2025 by anupam-banerjee Loading…
@vbadwaj
2
Write mmcif header
#2137 opened Jun 10, 2025 by jamesmkrieger • Draft
2
add wwpdb ftp and http
#2127 opened May 8, 2025 by jamesmkrieger • Draft
1
Fix parseMMCIF and fetchPDB to get CIF files
#2126 opened May 8, 2025 by jamesmkrieger Loading…
2
CaviTracer tool for detecting channels, tunnels, pores
#2018 opened Dec 18, 2024 by karolamik13 Loading…
@vbadwaj
20
add hierview numChains etc to general atomic
#1922 opened Jul 28, 2024 by jamesmkrieger • Draft
1
various fixes for handling ensembles with selections as ref
#1807 opened Dec 18, 2023 by jamesmkrieger Loading…
@AnthonyBogetti
3
WIP: Motif search
#1549 opened May 13, 2022 by mkonstanty • Draft
13
deprecation prep
#1399 opened Aug 1, 2021 by jamesmkrieger • Draft
7
added trajectory wrap method
#1344 opened Mar 11, 2021 by jamesmkrieger Loading…
31
New Hybrid Modules
#1309 opened Feb 16, 2021 by jamesmkrieger • Draft
@vbadwaj
6
charmm-gui interface
#1226 opened Dec 22, 2020 by jamesmkrieger • Draft
1
Chain alignment fixes
#1220 opened Dec 21, 2020 by jamesmkrieger • Draft
1
bug fix on color handling for showProjection
#1070 opened Jun 10, 2020 by jamesmkrieger • Draft
28
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