Merge pull request #257 from martinfleis/mbc #281
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| name: Continuous Integration | |
| on: | |
| push: | |
| branches: | |
| - '*' | |
| pull_request: | |
| branches: | |
| - '*' | |
| schedule: | |
| - cron: '59 21 * * *' | |
| workflow_dispatch: | |
| inputs: | |
| version: | |
| description: Manual Test Run | |
| default: test | |
| required: false | |
| jobs: | |
| unittests: | |
| env: | |
| FETCH_DATA: python -c 'from libpysal.examples import load_example as ex; [ex(e) for e in ["columbus", "desmith", "sids2", "stl"]]' | |
| RUN_TEST: pytest esda -v -r a -n auto --cov esda --cov-config .coveragerc --cov-report xml --color yes --cov-append --cov-report term-missing | |
| name: CI (${{ matrix.os }}, ${{ matrix.environment-file }}) | |
| runs-on: ${{ matrix.os }} | |
| timeout-minutes: 25 | |
| strategy: | |
| matrix: | |
| os: [ubuntu-latest] | |
| environment-file: | |
| - ci/38.yaml | |
| - ci/38-numba.yaml | |
| - ci/39.yaml | |
| - ci/39-numba.yaml | |
| - ci/310.yaml | |
| - ci/310-numba.yaml | |
| - ci/310-DEV.yaml | |
| - ci/310-numba-DEV.yaml | |
| - ci/311.yaml | |
| - ci/311-numba.yaml | |
| - ci/311-DEV.yaml | |
| - ci/311-numba-DEV.yaml | |
| include: | |
| - environment-file: ci/310-numba.yaml | |
| os: macos-latest | |
| - environment-file: ci/311.yaml | |
| os: macos-latest | |
| - environment-file: ci/310-numba.yaml | |
| os: windows-latest | |
| - environment-file: ci/311.yaml | |
| os: windows-latest | |
| fail-fast: false | |
| steps: | |
| - name: checkout repo | |
| uses: actions/checkout@v3 | |
| - name: setup micromamba | |
| uses: mamba-org/provision-with-micromamba@main | |
| with: | |
| micromamba-version: 'latest' | |
| environment-file: ${{ matrix.environment-file }} | |
| channel-priority: 'flexible' | |
| - name: install bleeding edge libpysal (Ubuntu / Python 3.10) | |
| shell: bash -l {0} | |
| run: | | |
| pip install git+https://github.com/pysal/libpysal.git@main | |
| if: matrix.os == 'ubuntu-latest' && contains(matrix.environment-file, 'DEV') | |
| - name: environment info | |
| shell: bash -l {0} | |
| run: | | |
| micromamba info | |
| micromamba list | |
| - name: spatial versions | |
| shell: bash -l {0} | |
| run: 'python -c "import geopandas; geopandas.show_versions();"' | |
| - name: run tests - bash | |
| shell: bash -l {0} | |
| run: | | |
| ${{ env.FETCH_DATA }} | |
| ${{ env.RUN_TEST }} | |
| if: matrix.os != 'windows-latest' | |
| - name: run tests - powershell | |
| shell: powershell | |
| run: | | |
| ${{ env.FETCH_DATA }} | |
| ${{ env.RUN_TEST }} | |
| if: matrix.os == 'windows-latest' | |
| - name: ${{ matrix.os }}, ${{ matrix.environment-file }} | |
| uses: codecov/codecov-action@v3 | |
| with: | |
| token: ${{ secrets.CODECOV_TOKEN }} | |
| file: ./coverage.xml | |
| name: esda-codecov |