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Raymond Kiu
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Jun 29, 2020
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@@ -10,7 +10,7 @@ $ fastqinfo-2.0.sh -h | |
This bash script calculates actual sequencing coverage(X) | ||
Fasta assembly and raw fastq files (paired-end) are needed | ||
Usage: /hpc-home/kiur/script/fastqinfo-2.0.sh [options] fastq_R1 fastq_R2 fasta_assembly | ||
Usage: /fastqinfo-2.0.sh [options] fastq_R1 fastq_R2 fasta_assembly | ||
Option: | ||
-r insert size (default=125) | ||
-h print usage and exit | ||
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@@ -59,4 +59,4 @@ This script has been tested on Linux OS, it should run smoothly with no dependen | |
[GPLv3](https://github.com/raymondkiu/fastq-info/blob/master/LICENSE) | ||
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## Author | ||
Raymond Kiu [email protected] | ||
Raymond Kiu [email protected] |