This repo represents the majority of my MSc research and all code related to my ''main'' MSc paper. It's cloned on both Graham/Nibi (Alliance Can) and on Wessex/Carthage (UAlberta HPC). (Hence some functions are meant to be run on Graham and others on Carthage!)
masks : contains nc files of various masks and meshes that are needed in the below scripts
🧐 AR7W_MLE_xsection : analyses of densities and s.f. across the AR7W section
⚙️ Argo_gridding_ANHA4 : puts 1D Argo data from mixedlayer.ucsd.edu onto the ANHA4 grid
🧐 energetics : analyses of EKE and energy transfer terms in ANHA4
🏞️ figure_AR7W_MLE_xsection : produces figure of AR7W cross section showing the s.f. hard at work
🏞️ figure_ConvR_ConvV.py : produces figure of convective resistance and volume in ANHA4
🏞️ figure_LabSea_HC_and_SC.py : produces figure of heat and salt content in the Lab Sea
🏞️ figure_LabSea_and_grid_map.py : produces figure of the Lab Sea and the ANHA4 grid
🏞️ figure_MLDs_body.py : produces figure (maps) of MLDs in ANHA4 and LAB60
🏞️ figure_MLDs_supplemental : produces figure (maps) of MLD anomalies compared to Argo
🏞️ figure_MLE.py : produces figure showing the MLE ''magnitude'' in space and time
🏞️ figure_biogeochem.py : produces time series of CO2 and oxygen contents from BLING
🏞️ figure_energetics_supplemental : produces figure showing the energetics data from energetics.py
🏞️ figure_ls3k_fluxes : produces figure of volume flux anomalies (1) per section and (2) over time series
🏞️ filepaths.py : creates .txt's (saved outside this repo) of output files on Graham
🧐 ls3k_biogeochem.py : analyses of CO2 and oxygen content in the interior Lab Sea over time
🧐 ls3k_contents : analyses of heat and salt content in the interior Lab Sea over time
🧐 ls3k_fluxes : analyses of boudnary -> interior volume, salt, heat, and freshwater fluxes
⚙️ ls3k_mask_boundary.py : extracts the bounding cells defining the edge of the 3,000 m isobath mask
⚙️ mask_maker.py : used to create the region masks used in the paper
🧐 stratification.py : analyses relating to convective resistance, convective volume, and MLD for ANHA4, Argo, and LAB60
🧐 = analysis script using ANHA4, LAB60, and/or Argo data to produce .nc's used to produce figures
⚙️ = utility script useful in some way for the analysis
🏞️ = figure script using the .nc's from the analysis scripts to produce .svg's (which are touched up in Inkscape and then put into the paper)