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Update adapters.py #84

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6261050
Update adapters.py
ColinAnthony Apr 28, 2019
379a523
Update adapters.py
ColinAnthony Apr 30, 2019
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38 changes: 37 additions & 1 deletion porechop/adapters.py
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Original file line number Diff line number Diff line change
Expand Up @@ -169,7 +169,43 @@ def get_barcode_name(self):
end_sequence=('BC11', 'GTTTCATCTATCGGAGGGAATGGA')),
Adapter('Barcode 12 (reverse)',
start_sequence=('BC12_rev', 'TCCGATTCTGCTTCTTTCTACCTG'),
end_sequence=('BC12', 'CAGGTAGAAAGAAGCAGAATCGGA')),
end_sequence=('BC12', 'CAGGTAGAAAGAAGCAGAATCGGA')),
Adapter('Barcode 13 (reverse)',
start_sequence=('BC13_rev', 'AGAACGACTTCCATACTCGTGTGA'),
end_sequence=('BC13', 'TCACACGAGTATGGAAGTCGTTCT')),
Adapter('Barcode 14 (reverse)',
start_sequence=('BC14_rev', 'AACGAGTCTCTTGGGACCCATAGA'),
end_sequence=('BC14', 'TCTATGGGTCCCAAGAGACTCGTT')),
Adapter('Barcode 15 (reverse)',
start_sequence=('BC15_rev', 'AGGTCTACCTCGCTAACACCACTG'),
end_sequence=('BC15', 'CAGTGGTGTTAGCGAGGTAGACCT')),
Adapter('Barcode 16 (reverse)',
start_sequence=('BC16_rev', 'CGTCAACTGACAGTGGTTCGTACT'),
end_sequence=('BC16', 'AGTACGAACCACTGTCAGTTGACG')),
Adapter('Barcode 17 (reverse)',
start_sequence=('BC17_rev', 'ACCCTCCAGGAAAGTACCTCTGAT'),
end_sequence=('BC17', 'ATCAGAGGTACTTTCCTGGAGGGT')),
Adapter('Barcode 18 (reverse)',
start_sequence=('BC18_rev', 'CCAAACCCAACAACCTAGATAGGC'),
end_sequence=('BC18', 'GCCTATCTAGGTTGTTGGGTTTGG')),
Adapter('Barcode 19 (reverse)',
start_sequence=('BC19_rev', 'GTTCCTCGTGCAGTGTCAAGAGAT'),
end_sequence=('BC19', 'ATCTCTTGACACTGCACGAGGAAC')),
Adapter('Barcode 20 (reverse)',
start_sequence=('BC20_rev', 'TTGCGTCCTGTTACGAGAACTCAT'),
end_sequence=('BC20', 'ATGAGTTCTCGTAACAGGACGCAA')),
Adapter('Barcode 21 (reverse)',
start_sequence=('BC21_rev', 'GAGCCTCTCATTGTCCGTTCTCTA'),
end_sequence=('BC21', 'TAGAGAACGGACAATGAGAGGCTC')),
Adapter('Barcode 22 (reverse)',
start_sequence=('BC22_rev', 'ACCACTGCCATGTATCAAAGTACG'),
end_sequence=('BC22', 'CGTACTTTGATACATGGCAGTGGT')),
Adapter('Barcode 23 (reverse)',
start_sequence=('BC23_rev', 'CTTACTACCCAGTGAACCTCCTCG'),
end_sequence=('BC23', 'CGAGGAGGTTCACTGGGTAGTAAG')),
Adapter('Barcode 24 (reverse)',
start_sequence=('BC24_rev', 'GCATAGTTCTGCATGATGGGTTAG'),
end_sequence=('BC24', 'CTAACCCATCATGCAGAACTATGC')),

# Other barcoding kits (like the PCR and rapid barcodes) use the forward barcode at the
# start of the read and the rev comp barcode at the end of the read.
Expand Down