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  4.2.0

  lbergelson announced Apr 13, 2025 in Announcements

  

  

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  Interchangably use IndexedFastaSequenceFile and BlockCompressedIndexedFastaSequenceFile

  dariober asked Mar 25, 2025 in Q&A · Answered

  

  

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  How does DuplicateSetIterator choose the same representative in the duplicate sets for a read and its mate?

  limwz01 started Nov 26, 2024 in General

  

  

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  4.1.2

  lbergelson announced Oct 9, 2024 in Announcements

  

  

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  4.1.1

  droazen announced Jun 29, 2024 in Announcements

  

  

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  VCF validation using HTSJDK

  makenzi-nzau started Feb 16, 2024 in General

  

  

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  Creating a bai index from a CRAM file

  BeatWolf started Oct 22, 2023 in General

  

  

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  4.0.1

  lbergelson announced Aug 8, 2023 in Announcements

  

  

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  4.0.0

  lbergelson announced Aug 3, 2023 in Announcements

  

  

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  I want to use rsId in Java to query VCF files. How can I accomplish this?

  Opticalproperty asked May 29, 2023 in Q&A · Unanswered

  

  

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  3.0.5

  lbergelson announced Feb 22, 2023 in Announcements

  

  

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  Reading VCF file features using custom 'Allele' subclass

  makenzi-nzau asked Feb 16, 2023 in Q&A · Answered

  

  

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  VariantContext subcontexting- possible on alleles?

  makenzi-nzau started Jan 24, 2023 in General

  

  

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  3.0.4

  lbergelson announced Nov 23, 2022 in Announcements

  

  

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  3.0.2

  lbergelson announced Oct 12, 2022 in Announcements

  

  

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  Is there any way to query from a zipped(*.vcf.gz) and indexed(*.vcf.gx.tbi) file with chr,position,ref and alt("chr2:9452897_AT_T)")

  amirul99 asked Oct 6, 2022 in Q&A · Answered

  

  

  

  

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