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270 task add 20 aqms to bioacoustic qc #279

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270 task add 20 aqms to bioacoustic qc #279

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@ibevers ibevers commented Mar 14, 2025 •
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Description

Depends on:
#282
#278

Related Issue(s)

Motivation and Context

How Has This Been Tested?

Screenshots (if appropriate):

Types of changes

  • Bug fix (non-breaking change which fixes an issue)
  • New feature (non-breaking change which adds functionality)
  • Breaking change (fix or feature that would cause existing functionality to change)

Checklist:

  • I have added tests to cover my changes.
  • All new and existing tests passed.
  • My code follows the code style of this project.

ibevers added 23 commits March 14, 2025 14:08
@ibevers
Add metrics field to taxonomy tree
47e2289
@ibevers
Rename check_node to evalutate_node
788f1fc
@ibevers
Use generic audio_quality_check function with lambdas
3a9b124
@ibevers
Update checks to return evaluated boolean
85ab4ed
@ibevers
Update audio_quality_check to store results in df
0281590
@ibevers
Move, rename, and optimize audio quality check function
dabcc47
@ibevers
Update evaluate_node to update a dataframe and calculate metrics
7eeac7b
@ibevers
Update check_quality to take df parameter
44ccc93
@ibevers
Update metrics and checks default to empty list
42522db
@ibevers
Update hardcoded test trees to reflect new structure
9c36d7a
@ibevers
Update test_evaluate_node and invert check conditions
a02886b
@ibevers
Update test_run_taxonomy_subtree_checks_recursively
8946b06
@ibevers
Update test_check_quality
2c1d681
@ibevers
Add metrics.py
ea31043
@ibevers
Add proportion_silent_metric
68edaac
@ibevers
Add normalize method and normalized instance var
f7f1ef0
@ibevers
Add test_audio_normalize
459e652
@ibevers
Merge branch '280-task-add-normalize-method-to-audio' into 270-task-a…
5e55cc1 
…dd-20-aqms-to-bioacoustic-qc
@ibevers
Update proportion_silent_metric to use normalize method and normalize…
5b5fe6e 
…d instance var
@ibevers
Add proportion_silence_at_beginning_metric
0d8411b
@ibevers
Add bioacoustic qc metric tests
3292380
@ibevers
Add proportion_silence_at_end_metric
231e3e1
@ibevers
Add proportion_silence_at_end_metric test
f7125ba
@ibevers ibevers self-assigned this Mar 14, 2025
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