Snakemake workflow: transdecoder-smk

A Snakemake workflow for ORF prediction with transdecoder.

Usage

Used to predict ORFs from guided, de novo transcript assemblies form ONT or ILL rnaseq data.

TODO

• Replace <owner> and <repo> everywhere in the template (also under .github/workflows) with the correct <repo> name and owning user or organization.
• Replace <name> with the workflow name (can be the same as <repo>).
• Replace <description> with a description of what the workflow does.
• The workflow will occur in the snakemake-workflow-catalog once it has been made public. Then the link under "Usage" will point to the usage instructions if <owner> and <repo> were correctly set.