Releases: shenwei356/taxid-changelog
Releases · shenwei356/taxid-changelog
taxid-changelog v2025.05
update to 2025.05.01
taxid-changelog v2024.11
This version includes taxdump files of "2013-02-21", "2013-05-03", "2014-06-03","2014-07-22"
$ zcat taxid-changelog.csv.gz \
| csvtk grep -f taxid -p 562 \
| csvtk cut -f -lineage-taxids \
| csvtk pretty -W 38 -x ';'
taxid version change change-value name rank lineage
----- ---------- -------------- ------------- ---------------- ------- --------------------------------------
562 2013-02-21 NEW Escherichia coli species cellular organisms;Bacteria;
Proteobacteria;Gammaproteobacteria;
Enterobacteriales;Enterobacteriaceae;
Escherichia;Escherichia coli
562 2013-02-21 ABSORB 662101;662104 Escherichia coli species cellular organisms;Bacteria;
Proteobacteria;Gammaproteobacteria;
Enterobacteriales;Enterobacteriaceae;
Escherichia;Escherichia coli
562 2015-11-01 ABSORB 1637691 Escherichia coli species cellular organisms;Bacteria;
Proteobacteria;Gammaproteobacteria;
Enterobacteriales;Enterobacteriaceae;
Escherichia;Escherichia coli
562 2016-10-01 CHANGE_LIN_LIN Escherichia coli species cellular organisms;Bacteria;
Proteobacteria;Gammaproteobacteria;
Enterobacterales;Enterobacteriaceae;
Escherichia;Escherichia coli
562 2018-06-01 ABSORB 469598 Escherichia coli species cellular organisms;Bacteria;
Proteobacteria;Gammaproteobacteria;
Enterobacterales;Enterobacteriaceae;
Escherichia;Escherichia coli
562 2021-11-01 ABSORB 1806490 Escherichia coli species cellular organisms;Bacteria;
Proteobacteria;Gammaproteobacteria;
Enterobacterales;Enterobacteriaceae;
Escherichia;Escherichia coli
562 2023-02-01 CHANGE_LIN_LIN Escherichia coli species cellular organisms;Bacteria;
Pseudomonadota;Gammaproteobacteria;
Enterobacterales;Enterobacteriaceae;
Escherichia;Escherichia coli
taxid-changelog v2023.12
I changed a computer and didn't conclude the older taxdump files before 2014-08-01.
$ zcat taxid-changelog.csv.gz \
| csvtk grep -f taxid -p 562 \
| csvtk cut -f -lineage-taxids \
| csvtk pretty -W 38 -x ';'
taxid version change change-value name rank lineage
----- ---------- -------------- ------------- ---------------- ------- --------------------------------------
562 2014-08-01 NEW Escherichia coli species cellular organisms;Bacteria;
Proteobacteria;Gammaproteobacteria;
Enterobacteriales;Enterobacteriaceae;
Escherichia;Escherichia coli
562 2014-08-01 ABSORB 662101;662104 Escherichia coli species cellular organisms;Bacteria;
Proteobacteria;Gammaproteobacteria;
Enterobacteriales;Enterobacteriaceae;
Escherichia;Escherichia coli
562 2015-11-01 ABSORB 1637691 Escherichia coli species cellular organisms;Bacteria;
Proteobacteria;Gammaproteobacteria;
Enterobacteriales;Enterobacteriaceae;
Escherichia;Escherichia coli
562 2016-10-01 CHANGE_LIN_LIN Escherichia coli species cellular organisms;Bacteria;
Proteobacteria;Gammaproteobacteria;
Enterobacterales;Enterobacteriaceae;
Escherichia;Escherichia coli
562 2018-06-01 ABSORB 469598 Escherichia coli species cellular organisms;Bacteria;
Proteobacteria;Gammaproteobacteria;
Enterobacterales;Enterobacteriaceae;
Escherichia;Escherichia coli
562 2021-11-01 ABSORB 1806490 Escherichia coli species cellular organisms;Bacteria;
Proteobacteria;Gammaproteobacteria;
Enterobacterales;Enterobacteriaceae;
Escherichia;Escherichia coli
562 2023-02-01 CHANGE_LIN_LIN Escherichia coli species cellular organisms;Bacteria;
Pseudomonadota;Gammaproteobacteria;
Enterobacterales;Enterobacteriaceae;
Escherichia;Escherichia coli
taxid-changelog v2023.04
udpate readme
taxid-changelog v2022.11
2022-08-01
taxid-changelog v2022.08
2022-08-01
v2022.03b
Contributors
pmenzel
Assets 3
taxid-changelog v2022.03
check some results of 'REUSE_DEL'
taxid-changelog v2021.11
check some results of 'REUSE_DEL'
taxid-changelog v2021.10
v2021-10-01