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@CellProfiler @carpenterlab @cytomining @piximi

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  1. cellpainting-gallery Public

    Forked from broadinstitute/cellpainting-gallery

    Cell Painting Gallery

  2. datasets Public

    Forked from jump-cellpainting/datasets

    Images and other data from the JUMP Cell Painting Consortium

    Jupyter Notebook

  3. jump-profiling-recipe Public

    Forked from broadinstitute/jump-profiling-recipe

    Workflow for processing cpg0016-jump profiles

    Python

  4. carpenter-singh-lab/2024_Arevalo_NeurIPS_MotiVE Public

    Python 19 4

  5. jump-cellpainting/2024_Chandrasekaran_Morphmap Public

    Jupyter Notebook 1 3

  6. cytomining/copairs Public

    Find profile pairs and compute metrics between them.

    Python 17 9

2,078 contributions in the last year

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Activity overview

Loading A graph representing shntnu's contributions from July 07, 2024 to July 08, 2025. The contributions are 85% commits, 8% pull requests, 6% issues, 1% code review.

Contribution activity

July 2025

Created 1 repository

Created a pull request in cytomining/copairs that received 5 comments

feat: add generic copairs runner for flexible analysis configurations

Summary Adds a generic copairs runner (utils/copairs_runner.py) that enables flexible analysis through YAML/JSON configuration Includes example co…

+3,079 −2,217 lines changed 5 comments
Opened 3 other pull requests in 3 repositories
Reviewed 2 pull requests in 2 repositories

Created an issue in broadinstitute/monorepo that received 5 comments

Update JUMP profile URLs to new structure

This repository may contain references to JUMP profile data that need to be updated to reflect the new directory structure. Context The JUMP Cell P…

5 comments
6 contributions in private repositories Jul 3
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