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Add type hinting

Add type hinting #1727

Re-run triggered November 7, 2024 22:18
Status Failure
Total duration 14m 14s
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testing.yml

on: pull_request
Matrix: test
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3 errors and 19 warnings
latest supported versions
The process '/usr/share/miniconda/condabin/conda' failed with exit code 1
oldest supported versions
The process '/usr/share/miniconda/condabin/conda' failed with exit code 1
macOS latest
The process '/Users/runner/miniconda3/condabin/conda' failed with exit code 1
latest supported versions
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/checkout@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
latest supported versions
/usr/share/miniconda/lib/python3.12/site-packages/conda/base/context.py:198: FutureWarning: Adding 'defaults' to channel list implicitly is deprecated and will be removed in 25.3. To remove this warning, please choose a default channel explicitly with conda's regular configuration system, e.g. by adding 'defaults' to the list of channels: conda config --add channels defaults For more information see https://docs.conda.io/projects/conda/en/stable/user-guide/configuration/use-condarc.html deprecated.topic(
latest supported versions
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
latest supported versions
/usr/share/miniconda/lib/python3.12/argparse.py:2006: FutureWarning: `remote_definition` is deprecated and will be removed in 25.9. Use `conda env create --file=URL` instead. action(self, namespace, argument_values, option_string)
latest supported versions
Pip subprocess error: Running command git clone --filter=blob:none --quiet https://github.com/CobayaSampler/cobaya.git /tmp/pip-install-wl4kbjgo/cobaya_29b7dabd657a4087bc9b367ee31a144b Running command git checkout -b action_types --track origin/action_types Switched to a new branch 'action_types' branch 'action_types' set up to track 'origin/action_types'. error: subprocess-exited-with-error × python setup.py bdist_wheel did not run successfully. │ exit code: 1 ╰─> [592 lines of output] /usr/share/miniconda/envs/soliket-tests/lib/python3.11/site-packages/setuptools/__init__.py:94: _DeprecatedInstaller: setuptools.installer and fetch_build_eggs are deprecated. !! ******************************************************************************** Requirements should be satisfied by a PEP 517 installer. If you are using pip, you can try `pip install --use-pep517`. ******************************************************************************** !! dist.fetch_build_eggs(dist.setup_requires) WARNING setuptools_scm.pyproject_reading toml section missing 'pyproject.toml does not contain a tool.setuptools_scm section' Traceback (most recent call last): File "/tmp/pip-install-wl4kbjgo/pyccl_c846fa8d660c4d8c82649058f49a163d/.eggs/setuptools_scm-8.1.0-py3.11.egg/setuptools_scm/_integration/pyproject_reading.py", line 36, in read_pyproject section = defn.get("tool", {})[tool_name] ~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^ KeyError: 'setuptools_scm' running bdist_wheel running build running build_py CMake Deprecation Warning at CMakeLists.txt:1 (cmake_minimum_required): Compatibility with CMake < 3.5 will be removed from a future version of CMake. Update the VERSION argument <min> value or use a ...<max> suffix to tell CMake that the project does not need compatibility with older versions. -- No build type selected, default to Release -- CMAKE_BUILD_TYPE: Release -- The C compiler identification is GNU 13.3.0 -- The CXX compiler identification is GNU 13.3.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/share/miniconda/envs/soliket-tests/bin/x86_64-conda-linux-gnu-cc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/share/miniconda/envs/soliket-tests/bin/x86_64-conda-linux-gnu-c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done CMake Warning (dev) at /usr/share/miniconda/envs/soliket-tests/share/cmake-3.30/Modules/FindPackageHandleStandardArgs.cmake:441 (message): The package name passed to `find_package_handle_standard_args` (PkgConfig) does not match the name of the calling package (FFTW). This can lead to problems in calling code that expects `find_package` result variables (e.g., `_FOUND`) to follow a certain pattern. Call Stack (most recent call first): /usr/share/miniconda/envs/soliket-tests/share/cmake-3.30/Modules/FindPkgConfig.cmake:114 (find_package_handle_standard_args) cmake/Modules/FindFFTW.cmake:18 (include) cmake/Modules/BuildFFTW.cmake:6 (find_package) CMakeLists.txt:48 (include) This warning is for project developers. Use -Wno-dev to suppress it. -- Found PkgConfig: /usr/bin/pkg-config (found version "1.8.0") -- Found FFTW: /usr/share/miniconda/envs/soliket-tests/include -- Found GSL: /usr/share/miniconda/envs/soliket-tests/include (found suitable version "2.7", minimum required is "2.1") -- Found OpenMP_C: -fopenmp (found version "4.5") -- Found OpenMP_CXX: -fopenmp (found version "4.5") -- Found OpenMP: TRUE (found version "4.5")
oldest supported versions
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/checkout@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
oldest supported versions
/usr/share/miniconda/lib/python3.12/site-packages/conda/base/context.py:198: FutureWarning: Adding 'defaults' to channel list implicitly is deprecated and will be removed in 25.3. To remove this warning, please choose a default channel explicitly with conda's regular configuration system, e.g. by adding 'defaults' to the list of channels: conda config --add channels defaults For more information see https://docs.conda.io/projects/conda/en/stable/user-guide/configuration/use-condarc.html deprecated.topic(
oldest supported versions
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
oldest supported versions
/usr/share/miniconda/lib/python3.12/argparse.py:2006: FutureWarning: `remote_definition` is deprecated and will be removed in 25.9. Use `conda env create --file=URL` instead. action(self, namespace, argument_values, option_string)
oldest supported versions
Pip subprocess error: Running command git clone --filter=blob:none --quiet https://github.com/CobayaSampler/cobaya.git /tmp/pip-install-o2m84anx/cobaya_8706b9c6b0cf495a91ac979a334c8551 Running command git checkout -b action_types --track origin/action_types Switched to a new branch 'action_types' branch 'action_types' set up to track 'origin/action_types'. error: subprocess-exited-with-error × python setup.py bdist_wheel did not run successfully. │ exit code: 1 ╰─> [589 lines of output] /usr/share/miniconda/envs/soliket-tests/lib/python3.9/site-packages/setuptools/__init__.py:94: _DeprecatedInstaller: setuptools.installer and fetch_build_eggs are deprecated. !! ******************************************************************************** Requirements should be satisfied by a PEP 517 installer. If you are using pip, you can try `pip install --use-pep517`. ******************************************************************************** !! dist.fetch_build_eggs(dist.setup_requires) WARNING setuptools_scm.pyproject_reading toml section missing 'pyproject.toml does not contain a tool.setuptools_scm section' Traceback (most recent call last): File "/tmp/pip-install-o2m84anx/pyccl_aadff9f88ce1442f9ab3e6fedd882411/.eggs/setuptools_scm-8.1.0-py3.9.egg/setuptools_scm/_integration/pyproject_reading.py", line 36, in read_pyproject section = defn.get("tool", {})[tool_name] KeyError: 'setuptools_scm' running bdist_wheel running build running build_py CMake Deprecation Warning at CMakeLists.txt:1 (cmake_minimum_required): Compatibility with CMake < 3.5 will be removed from a future version of CMake. Update the VERSION argument <min> value or use a ...<max> suffix to tell CMake that the project does not need compatibility with older versions. -- No build type selected, default to Release -- CMAKE_BUILD_TYPE: Release -- The C compiler identification is GNU 13.3.0 -- The CXX compiler identification is GNU 13.3.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/share/miniconda/envs/soliket-tests/bin/x86_64-conda-linux-gnu-cc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/share/miniconda/envs/soliket-tests/bin/x86_64-conda-linux-gnu-c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done CMake Warning (dev) at /usr/share/miniconda/envs/soliket-tests/share/cmake-3.30/Modules/FindPackageHandleStandardArgs.cmake:441 (message): The package name passed to `find_package_handle_standard_args` (PkgConfig) does not match the name of the calling package (FFTW). This can lead to problems in calling code that expects `find_package` result variables (e.g., `_FOUND`) to follow a certain pattern. Call Stack (most recent call first): /usr/share/miniconda/envs/soliket-tests/share/cmake-3.30/Modules/FindPkgConfig.cmake:114 (find_package_handle_standard_args) cmake/Modules/FindFFTW.cmake:18 (include) cmake/Modules/BuildFFTW.cmake:6 (find_package) CMakeLists.txt:48 (include) This warning is for project developers. Use -Wno-dev to suppress it. -- Found PkgConfig: /usr/bin/pkg-config (found version "1.8.0") -- Found FFTW: /usr/share/miniconda/envs/soliket-tests/include -- Found GSL: /usr/share/miniconda/envs/soliket-tests/include (found suitable version "2.7", minimum required is "2.1") -- Found OpenMP_C: -fopenmp (found version "4.5") -- Found OpenMP_CXX: -fopenmp (found version "4.5") -- Found OpenMP: TRUE (found version "4.5") -- Found SWIG: /usr/share/miniconda/envs/soliket-tes
macOS latest
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/checkout@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
macOS latest
/Users/runner/miniconda3/lib/python3.12/site-packages/conda/base/context.py:198: FutureWarning: Adding 'defaults' to channel list implicitly is deprecated and will be removed in 25.3. To remove this warning, please choose a default channel explicitly with conda's regular configuration system, e.g. by adding 'defaults' to the list of channels: conda config --add channels defaults For more information see https://docs.conda.io/projects/conda/en/stable/user-guide/configuration/use-condarc.html deprecated.topic(
macOS latest
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
macOS latest
/Users/runner/miniconda3/lib/python3.12/argparse.py:2006: FutureWarning: `remote_definition` is deprecated and will be removed in 25.9. Use `conda env create --file=URL` instead. action(self, namespace, argument_values, option_string)
macOS latest
Pip subprocess error:
macOS latest
Running command git clone --filter=blob:none --quiet https://github.com/CobayaSampler/cobaya.git /private/var/folders/g6/rgtlsw6n123b0gt5483s5_cm0000gn/T/pip-install-asizmmlr/cobaya_534d0ed4033a42ebab5d36342d674ba6 Running command git checkout -b action_types --track origin/action_types Switched to a new branch 'action_types' branch 'action_types' set up to track 'origin/action_types'. error: subprocess-exited-with-error × python setup.py bdist_wheel did not run successfully. │ exit code: 1 ╰─> [293 lines of output] /Users/runner/miniconda3/envs/soliket-tests/lib/python3.11/site-packages/setuptools/__init__.py:94: _DeprecatedInstaller: setuptools.installer and fetch_build_eggs are deprecated. !! ******************************************************************************** Requirements should be satisfied by a PEP 517 installer. If you are using pip, you can try `pip install --use-pep517`. ******************************************************************************** !! dist.fetch_build_eggs(dist.setup_requires) WARNING setuptools_scm.pyproject_reading toml section missing 'pyproject.toml does not contain a tool.setuptools_scm section' Traceback (most recent call last): File "/private/var/folders/g6/rgtlsw6n123b0gt5483s5_cm0000gn/T/pip-install-asizmmlr/pyccl_bb447f4577ec4ab4bc429f15f61fc084/.eggs/setuptools_scm-8.1.0-py3.11.egg/setuptools_scm/_integration/pyproject_reading.py", line 36, in read_pyproject section = defn.get("tool", {})[tool_name] ~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^ KeyError: 'setuptools_scm' running bdist_wheel running build running build_py CMake Deprecation Warning at CMakeLists.txt:1 (cmake_minimum_required): Compatibility with CMake < 3.5 will be removed from a future version of CMake. Update the VERSION argument <min> value or use a ...<max> suffix to tell CMake that the project does not need compatibility with older versions. -- No build type selected, default to Release -- CMAKE_BUILD_TYPE: Release -- The C compiler identification is Clang 17.0.6 -- The CXX compiler identification is Clang 17.0.6 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /Users/runner/miniconda3/envs/soliket-tests/bin/arm64-apple-darwin20.0.0-clang - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /Users/runner/miniconda3/envs/soliket-tests/bin/arm64-apple-darwin20.0.0-clang++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done CMake Warning (dev) at /Users/runner/miniconda3/envs/soliket-tests/share/cmake-3.30/Modules/FindPackageHandleStandardArgs.cmake:441 (message): The package name passed to `find_package_handle_standard_args` (PkgConfig) does not match the name of the calling package (FFTW). This can lead to problems in calling code that expects `find_package` result variables (e.g., `_FOUND`) to follow a certain pattern. Call Stack (most recent call first): /Users/runner/miniconda3/envs/soliket-tests/share/cmake-3.30/Modules/FindPkgConfig.cmake:114 (find_package_handle_standard_args) cmake/Modules/FindFFTW.cmake:18 (include) cmake/Modules/BuildFFTW.cmake:6 (find_package) CMakeLists.txt:48 (include) This warning is for project developers. Use -Wno-dev to suppress it. -- Found PkgConfig: /opt/homebrew/bin/pkg-config (found version "0.29.2") -- Found FFTW: /Users/runner/miniconda3/envs/soliket-tests/include -- Found GSL: /Users/runner/miniconda3/envs/soliket-tests/include (found suitable version "2.7", minimum required is "2.1") -- Found OpenMP_C: -fopenmp
macOS latest
CondaEnvException: Pip failed
Windows latest
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/checkout@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
Windows latest
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.