fix: use correct path of vega plot template even when running workflo…

…w as a module
snakemake-workflows · Aug 31, 2021 · 68b8817 · 68b8817
1 parent 5d610df
commit 68b8817
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/workflow/rules/diffexp.smk b/workflow/rules/diffexp.smk
@@ -339,7 +339,7 @@ rule vg2svg:
 rule vega_volcano_plot:
     input:
         tsv="results/tables/diffexp/{model}.transcripts.diffexp.tsv",
-        spec="resources/vega_volcano_plot.json",
+        spec=workflow.source_path("../../resources/vega_volcano_plot.json"),
     output:
         json="results/plots/interactive/volcano/{model}.vl.json",
         html=report(