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NCBI NT database taxonomy mapping using <code>mmseqs databases</code> .

Status: Open.

#1054 In soedinglab/MMseqs2;

· jackomak opened on Nov 14, 2025

Confused about Abundance Analysis tutorial

Status: Open.

#1053 In soedinglab/MMseqs2;

· gamalielcabria opened on Nov 13, 2025

Pipeline on multiple samples

Status: Open.

#1051 In soedinglab/MMseqs2;

· GiBacci opened on Nov 5, 2025

Using uniclust and other precompile clustered dbs

Status: Open.

#1050 In soedinglab/MMseqs2;

· edotau opened on Oct 29, 2025

align vs alignall

Status: Open.

#1049 In soedinglab/MMseqs2;

· maartensandbox opened on Oct 29, 2025

Abundance analysis tutorial output

Status: Open.

#1048 In soedinglab/MMseqs2;

· danieldavilaaleman opened on Oct 28, 2025

SILVA db issue in mmseqs2 version 18

Status: Open.

#1047 In soedinglab/MMseqs2;

· MorganASJ opened on Oct 28, 2025

about createdb, I want to know if the results of the database built by GPU and CPU are different, and whether the GPU version of the database cannot be used for linclust

Status: Open.

#1046 In soedinglab/MMseqs2;

· juoliii opened on Oct 28, 2025

determine MMseqs2 version used to build existing GTDB index files?

Status: Open.

#1045 In soedinglab/MMseqs2;

· swohlrab opened on Oct 22, 2025

Including <code>taln</code> column in output segfaults

Status: Open.

#1044 In soedinglab/MMseqs2;

· rickbeeloo opened on Oct 16, 2025

Confusing warning message for<code>createdb-mode</code>

Status: Open.

#1042 In soedinglab/MMseqs2;

· Ieremie opened on Oct 14, 2025

FASTA record name prefix exception

Status: Open.

#1041 In soedinglab/MMseqs2;

· durrantmm opened on Oct 8, 2025