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Pull requests: spacetx/starfish

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Pull requests list

Add ImageStack.from_xarray() constructor for memory-efficient round processing
#2155 opened Nov 5, 2025 by Copilot AI Loading…
11 tasks done
1
@shachafl
7
Fix BlobDetector coordinate extraction and ensure consistent results across dimensionalities
#2154 opened Nov 5, 2025 by Copilot AI • Draft
6 tasks done
1
@shachafl
14
Bump docutils from 0.19 to 0.22.2 dependencies Pull requests that update a dependency file python Pull requests that update Python code
#2148 opened Nov 3, 2025 by dependabot bot • Draft
Bump mypy from 1.10.1 to 1.18.2 dependencies Pull requests that update a dependency file python Pull requests that update Python code
#2120 opened Oct 28, 2025 by dependabot bot • Draft
Added high-level diagrams
#2083 opened Jun 29, 2025 by ivanmilevtues Loading…
10
fix: index shift correction for blob detection in 2d tiles
#2076 opened May 16, 2025 by shachafl • Draft Release 0.3.4
1
@shachafl
3
Drop Python 3.9 support due to critical security issue with a dependency
#2061 opened Mar 27, 2025 by shachafl • Draft Drop support for Python 3.9
@shachafl
2
Bump mistune from 0.8.4 to 2.0.3 in /requirements dependencies Pull requests that update a dependency file
#1987 opened Jul 29, 2022 by dependabot bot • Draft
change Codebook data default dtype to float
#1975 opened Mar 16, 2022 by berl Loading…
SpotFindingResults Serialization to Disk (and loading)
#1961 opened Oct 13, 2021 by ctcisar Loading…
8
adds napari screenshot to quickstart
#1910 opened Aug 26, 2020 by neuromusic Loading…
3
RNAscope HiPlex Pipeline Example
#1909 opened Jul 30, 2020 by mattcai • Draft
Add method runtime parameters to logging
#1685 opened Dec 4, 2019 by shanaxel42 Loading…
1
3
9.) graph based decoding
#1613 opened Oct 15, 2019 by shanaxel42 Loading… 0.2.0
9
Graph based decoding initial commit
#1482 opened Aug 5, 2019 by gapartel Loading…
12
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