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stimilsina24/README.md

Hi, I'm Santosh! 👋

I am a scientist bridging the gap between bioinformatics and wet lab discovery. Currently utilizing single-cell and bulk RNA-seq to uncover immune-suppressive mechanisms in oncology.

🧬 Core Skills: Molecular Biology (CRISPR, Flow Cytometry, In vitro and in vivo cancer biology, Immunology) + Data Science (R, Python).

📄 Key Publication: [https://www.nature.com/articles/s41467-025-59186-3]

🛠 Tools & Technologies

R Python Linux Git

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  1. BRN-skill-assessments BRN-skill-assessments Public

    Forked from Bioinformatics-Research-Network/skill-assessments

    Training requirements for joining projects

    HTML

  2. Bulk-RNA-seq-R Bulk-RNA-seq-R Public

    Bulk RNA sequencing analysis in R.

    HTML

  3. HackBio-StageOne HackBio-StageOne Public

    1) Best practices for scRNA-seq(summary). 2) Python functions and plots.

    Python

  4. HackBio-StageThree HackBio-StageThree Public

    SARS-CoV-2 Infection Dynamics in Human Bronchial Epithelial Cells using Scanpy

    Jupyter Notebook

  5. HackBio-StageTwo HackBio-StageTwo Public

    Reproducing a core Single-Cell RNA-Seq Analysis pipeline using Scanpy

    Jupyter Notebook

  6. HackBio-StageZero HackBio-StageZero Public

    1) scRNA-seq in cancer(summary). 2) Python loop to print out team member info.

    Python