Replies: 3 comments
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Hello @abailey20, It looks like you are predicting on one frame right now. Can you try doing this from the GUI or changing your frames to a list of frames? Also, do you know if at the end of training you were able to get metrics from your model, implying it was able to get predictions at the end of training? Thank you! Elizabeth https://docs.sleap.ai/v1.5.1/api/cli/#sleap.cli.track |
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Hi @eberrigan, I only selected to run inference on current frame as an example of the output of such an attempt. Right now I'm working from the GUI. Is it better to run inference from the CLI? I cannot get model evaluation metrics, any attempt to give me this output: Thanks, |
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Hi @eberrigan Here is an example of the parameters for training I am running. Despite in my first post SLEAP detected one cuda device. When I try to actually train a model it detects 0. There is also some warnings about not having dataloggers configured, I am not sure how to rectify that but to my knowledge it doesn't explain why my model can't predict anything. Below I've attached some images of the training set up menu to show why I've chosen the parameters for the receptive field. Input scaling for the centroid model might be too high but again I can only see how this might make training slower but not how it affects trainability. I'm training on 171 labelled frames. The skeleton I am using only has 4 nodes: nose, both eyes and the bum so there is no real candidate for an anchor node for the centroid model my questions:
I will post the training log as soo as I have it. But would appreciate any clarity on the points above. Thank you for any and all help! Best,
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Hi all,
I am trying to run inference after training a top-down model on videos of a single animal. Training seems to go smoothly and validation predictions look good but if I try to get it to predict on a random number of frames I get "Inference ran on number of frames. Instances were predicted on 0 frames (number frames with no instances found).
This is what's in the terminal:
I've checked that the gpu is visible and run diagnostics. I can't see anything wrong:
Only thing I can think of is if the labels need to be in the same folder as the videos.
Any help/advice is appreciated!
Thanks,
A
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