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Metabolic feature based metabolite set enrichment analysis

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fMSEA

Dependencies

fmsea is a part of tidymass


About

fmsea is a R package which is used for metabolic feature based metabolite set enrichment analysis.

Installation

You can install fmsea from GitLab

if(!require(remotes)){
install.packages("remotes")
}
remotes::install_gitlab("jaspershen/fmsea")

or Github

remotes::install_github("tidymass/fmsea")

fmsea is a part of tidymass, so you can also install it by installing tidymass.

Usage

Please see the Help documents page to get the instruction of fmsea.

Need help?

If you have any questions about fmsea, please don’t hesitate to email me ([email protected]).

shenzutao1990

[email protected]

Twitter

M339, Alway Buidling, Cooper Lane, Palo Alto, CA 94304

Citation

If you use fmsea in your publications, please cite this paper:

Xiaotao Shen* (Corresponding Author)

fmsea: A R package for automatable compound annotation for LC−MS-based data

and

TidyMass: An Object-oriented Reproducible Analysis Framework for LC-MS Data.

Xiaotao Shen, Hong Yan, Chuchu Wang, Peng Gao, Caroline H. Johnson, Michael P. Snyder.

Web Link.

Thank you!

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Metabolic feature based metabolite set enrichment analysis

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