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Wow, amazing new feature, thanks. It's remarkable that it doesn't introduce the htslib dependency |
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seems like we only need the sequences ... so not too much point in htslib for just that and some filters |
Author
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@tlemane any chance you could provide some guidance on this? |
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Thanks for making this tool available - I've made some extensions to avoid writing huge files into fasta just to read back in.
These are working well for me, and though they might be helpful to others.
not sure if you want the bam support at all - or if you want it here vs. GATB upstream.