A tool for the spatial analysis of diversity

A comprehensive and customizable R package for microbiome analysis.

A pipeline for phylogenetic diversity analysis of GBIF-mediated data

parallel, efficient and ensemble analysis of Rao's Q spectral diversity using remote sensing datasets.

The following codes are focused on microbiome analysis, alpha, beta and relative abundance differences.

🦠Research project in Bioinformatics Institute 2023-2024

R package for building turnover saturation curves via bootstrapping

Microbiome Data Analysis

🌍🌾 Presentation of the article "Climate change may alter the availability of wild food plants in the Brazilian semiarid"

🦇🧫📊Supplementary materials for study on bat gut shotgun metagenomics

The Local Ecological Footprinting Tool (LEFT), is a web-based decision support tool which can help businesses minimise the environmental impacts of their activities when they make decisions about how land is used.

Data and code of Bauer et al. (2024) J Veg Sci

Take advantage of the adehabitat packages in R to determine ecological community richness: including alpha, beta, and gamma diversity!

Alpha, beta and gamma diversities are computed and visualized using formulas and using the R package vegetarian.

metaGEENOME is a 16S rRNA metagenomic analysis tool that encompasses nearly all steps of downstream analysis.