Search results

Multiple taxonomy hits per OTU despite --top_hits_only in VSEARCH?

question

Status: Open.

#603 In torognes/vsearch;

· SalmaSarker opened on May 30, 2025

command --makeudb_usearch cannot write to stdout?

enhancement

Status: Open.

#599 In torognes/vsearch;

· frederic-mahe opened on May 3, 2025

Add swarm-like tabular output to vsearch clustering options

question

Status: Open.

#597 In torognes/vsearch;

· Patg13 opened on Apr 29, 2025

Feature request: change the option "--top_hits_only" to "--top_N_hits_only"

Status: Open.

#592 In torognes/vsearch;

· tao-bioinfo opened on Feb 21, 2025

Available RAM and CPU cores reported by arch_get_memtotal() and arch_get_cores() may be misleading.

Documentation

enhancement

Status: Open.

#584 In torognes/vsearch;

· ndusek opened on Dec 11, 2024

Is there a way to filter fastq reads based on Qscore before paired end merging

enhancement

question

Status: Open.

#575 In torognes/vsearch;

· simmimourya opened on Oct 2, 2024

Very slow processing sintax vsearch/2.28.1

Documentation

enhancement

Status: Open.

#570 In torognes/vsearch;

· msalamon2 opened on Aug 8, 2024

interpretation of --maxaccepts vsearch

Documentation

question

Status: Open.

#569 In torognes/vsearch;

· Robvh-git opened on Aug 5, 2024

--fastx_uniques: still reachable memory under certain conditions (minor issue)

enhancement

Status: Open.

#567 In torognes/vsearch;

· frederic-mahe opened on Jul 8, 2024

--fastq_ascii and --fastq_qmax must be no more than 126

question

Status: Open.

#564 In torognes/vsearch;

· goodcouscous opened on Jun 14, 2024

unexpected behaviour - v 2.28 sintax chooses first sequence when not classifiable

Status: Open.

#563 In torognes/vsearch;

· givdieri opened on May 17, 2024

missing userfields options

enhancement

Status: Open.

#548 In torognes/vsearch;

· frederic-mahe opened on Dec 6, 2023