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Issues: turbomam/biosample-basex

14 Open 25 Closed
14 Open 25 Closed
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Issues list

samples with missing Bioproject ids
#41 opened Aug 26, 2022 by realmarcin
Create 'assumptions & limitations' doc for Biosample project
#40 opened Aug 26, 2022 by realmarcin
add intermediate basex etc files for 'each' step in Makefile
#39 opened Aug 23, 2022 by realmarcin
do we have minimal metadata rules for inclusion in NMDC
#38 opened Feb 1, 2022 by turbomam
@turbomam
create a table with percent non-empty per column from the wide view
#34 opened Jan 5, 2022 by turbomam
add a units table like the wide repaired?
#33 opened Jan 5, 2022 by turbomam
get exp types and descriptions from BioProject
#31 opened Jan 5, 2022 by turbomam
per Chris call repaired table biosample and the raw table biosample_raw
#30 opened Jan 5, 2022 by turbomam
1
Write README or other documentation
#26 opened Jan 1, 2022 by turbomam
env_package repair only considers env_package, not anything else like model
#22 opened Dec 30, 2021 by turbomam
env_package repair: examine various taxon fields too?
#20 opened Dec 30, 2021 by turbomam
Special handling for Keywords portion of paragraph element?
#16 opened Dec 21, 2021 by turbomam
Are there enough DOIs to justify a column in SQLite?
#15 opened Dec 21, 2021 by turbomam
set up for production on large memory machines like NERSC cori
#1 opened Oct 4, 2021 by turbomam
5
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