File tree Expand file tree Collapse file tree 1 file changed +6
-13
lines changed
Expand file tree Collapse file tree 1 file changed +6
-13
lines changed Original file line number Diff line number Diff line change @@ -36,22 +36,15 @@ module_order:
3636 - picard
3737 - samtools
3838 - bcftools
39- - fastqc:
40- name: "FastQC (trimmed)"
41- anchor: "trimmed"
42- info: "This section of the report shows FastQC results after adapter trimming."
43- target: ""
44- path_filters:
45- - "*/qc/fastqc-trimmed/*_fastqc.zip"
4639 - fastqc:
4740 name: "FastQC (raw)"
4841 anchor: "raw"
4942 path_filters:
5043 - "*/qc/fastqc-raw/*_fastqc.zip"
5144 - fastq_screen:
52- name: "FastQ Screen (trimmed )"
45+ name: "FastQ Screen (raw )"
5346 path_filters:
54- - "*/qc/fastq_screen-trimmed /*"
47+ - "*/qc/fastq_screen-raw /*"
5548 - verifybamid
5649 - somalier
5750
@@ -87,8 +80,8 @@ custom_data:
8780 quac_watch_fastqc:
8881 parent_id: "quac_watch"
8982 id: "quac_watch_fastqc"
90- section_name: "FastQC (trimmed )"
91- description: 'Quick summary of FastQC (trimmed ) results. See <a href =" #trimmed " >FastQC</a > section below for detailed results.'
83+ section_name: "FastQC (raw )"
84+ description: 'Quick summary of FastQC (raw ) results. See <a href =" #raw " >FastQC</a > section below for detailed results.'
9285 file_format: "yaml"
9386 plot_type: "table"
9487 pconfig:
@@ -488,8 +481,8 @@ custom_data:
488481 quac_watch_fastq_screen:
489482 parent_id: "quac_watch"
490483 id: "quac_watch_fastq_screen"
491- section_name: "FastQ Screen (trimmed )"
492- description: 'Quick summary of FastQ Screen (trimmed ) results. See <a href =" #fastq_screen-1" >FastQ Screen</a > section below for detailed results.'
484+ section_name: "FastQ Screen (raw )"
485+ description: 'Quick summary of FastQ Screen (raw ) results. See <a href =" #fastq_screen-1" >FastQ Screen</a > section below for detailed results.'
493486 file_format: "yaml"
494487 plot_type: "table"
495488 pconfig:
You can’t perform that action at this time.
0 commit comments