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Make system testing github actions run faster

enhancementNew feature or requestNew feature or request

Status: Open.

#74 In uab-cgds-worthey/quac;

· ManavalanG opened on May 31, 2023

Rename default branch <code>master</code> to <code>main</code>

enhancementNew feature or requestNew feature or request

Status: Open.

#60 In uab-cgds-worthey/quac;

· ManavalanG opened on Jan 27, 2023

Separate output directory option for per-sample QC results and Project-level QC results

Status: Open.

#55 In uab-cgds-worthey/quac;

· ManavalanG opened on Jun 15, 2022

Number of decimal digits to show in multiqc report

has attachment

Status: Open.

#50 In uab-cgds-worthey/quac;

· ManavalanG opened on Apr 21, 2022

Multiqc rules at single-sample mode wants to run everytime new samples are added to project

Status: Open.

#42 In uab-cgds-worthey/quac;

· ManavalanG opened on Sep 9, 2021

Need to refactor fastq_screen testing in QuaC Watch?

has attachment

Status: Open.

#41 In uab-cgds-worthey/quac;

· ManavalanG opened on Aug 12, 2021

Add somalier's "middling allele balance" metric to QuaC Watch

Status: Open.

#40 In uab-cgds-worthey/quac;

· ManavalanG opened on Aug 12, 2021

Picard CollectMultipleMetrics takes too long to run

Status: Open.

#37 In uab-cgds-worthey/quac;

· ManavalanG opened on Jul 1, 2021

QuaC does not support projects with mixed WGS and WES samples

Status: Open.

#36 In uab-cgds-worthey/quac;

· ManavalanG opened on Jul 1, 2021

Automate relatedness verification based on info in input pedigree file

Status: Open.

#33 In uab-cgds-worthey/quac;

· ManavalanG opened on Jun 7, 2021

Automate verification of sex based on info in input pedigree file

Status: Open.

#32 In uab-cgds-worthey/quac;

· ManavalanG opened on Jun 7, 2021

Refactor how QuaC-Watch analyzes the results of fastqc's "Per Base Sequence Content" module results

Status: Open.

#31 In uab-cgds-worthey/quac;

· ManavalanG opened on Jun 7, 2021