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R serialization refactor #240

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R serialization refactor #240

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972802d
Add conversion methods for R lists.
aholmes Jun 20, 2025
4747fe4
Add "token" types for serializing R types.
aholmes Jun 23, 2025
337864b
Progress on R type conversion refactor.
aholmes Jun 25, 2025
34bd4b0
Fix type errors.
aholmes Jun 26, 2025
fc7d835
Clean up some left over cruft from refactor.
aholmes Jun 26, 2025
3401f3a
Fix issues with wrong values for empty inputs.
aholmes Jun 26, 2025
5075869
Add additional tests.
aholmes Jun 26, 2025
b688e5c
Consolidate type conversion methods.
aholmes Jun 26, 2025
d4e88a1
Refactor R serialization.
aholmes Jun 27, 2025
132d1b0
Make it possible to nest composite types.
aholmes Jun 27, 2025
098a5d9
Serialize Strings for R ingestion to handle quotes.
aholmes Jun 30, 2025
a65897e
Avoid catching application-ending exceptions.
aholmes Jul 1, 2025
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26 changes: 19 additions & 7 deletions src/programming/Ligare/programming/R/__init__.py
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Original file line number Diff line number Diff line change
@@ -1,20 +1,32 @@
from Ligare.programming.R.exception import RscriptProcessError, RscriptScriptError
from Ligare.programming.R.process import RProcessStepBuilder
from Ligare.programming.R.type_conversion import (
from Ligare.programming.R.serializers import (
boolean,
composite_type_from_parts,
from_parts,
number,
number_from_csv,
number_from_parts,
number_vector_from_csv,
string,
string_from_csv,
vector_from_csv,
vector_from_parts,
string_from_parts,
string_vector_from_csv,
)

__all__ = (
"RProcessStepBuilder",
"RscriptProcessError",
"RscriptScriptError",
"boolean",
"composite_type_from_parts",
"from_parts",
"number",
"number_from_csv",
"number_from_parts",
"number_vector_from_csv",
"string",
"string_from_csv",
"vector_from_csv",
"vector_from_parts",
"RscriptProcessError",
"RscriptScriptError",
"string_from_parts",
"string_vector_from_csv",
)
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