Releases: uclahs-cds/metapipeline-DNA
Releases · uclahs-cds/metapipeline-DNA
Release 7.0.0
Automatically generated after merging #258.
What's Changed
- Version-pin Action versions from common repository by @nwiltsie in #255
- Bump actions/checkout from 4 to 5 by @dependabot[bot] in #256
- Validation cleanup by @yashpatel6 in #257
- Prepare for version
7.0.0by @boutros-lab-infrastructure-owner in #258
New Contributors
- @dependabot[bot] made their first contribution in #256
Full Changelog: v7.0.0-rc.4...v7.0.0
Release 7.0.0-rc.4
Automatically generated after merging #253.
What's Changed
- Pipeline updates by @yashpatel6 in #251
- Adding mtDNA CN pipeline by @yashpatel6 in #252
- Prepare for version
7.0.0-rc.4by @boutros-lab-infrastructure-owner in #253
Full Changelog: v7.0.0-rc.3...v7.0.0-rc.4
Release 7.0.0-rc.3
Automatically generated after merging #250.
What's Changed
- Fix VCF handling bug by @yashpatel6 in #249
- Prepare for version
7.0.0-rc.3by @boutros-lab-infrastructure-owner in #250
Full Changelog: v7.0.0-rc.2...v7.0.0-rc.3
Release v7.0.0-rc.2
Release 7.0.0-rc.1
Automatically generated after merging #247.
What's Changed
- Add StableLift - sSNV by @yashpatel6 in #239
- SV Liftover Code by @yashpatel6 in #240
- gSNP Liftover by @yashpatel6 in #241
- Variant annotation starting with gSNP calls by @yashpatel6 in #242
- Update submodules by @yashpatel6 in #243
- Update log message by @yashpatel6 in #246
- Genetic Ancestry by @yashpatel6 in #244
- Prepare for version
7.0.0-rc.1by @boutros-lab-infrastructure-owner in #247
Full Changelog: v6.2.0...v7.0.0-rc.1
Release 6.2.0
Automatically generated after merging #238.
What's Changed
- Add pipelines to dependabot by @yashpatel6 in #234
- Merging gitsubmodule package system into one by @yashpatel6 in #235
- Update BAM2FASTQ Version by @yashpatel6 in #237
- Prepare for version
6.2.0by @boutros-lab-infrastructure-owner in #238
Full Changelog: v6.1.0...v6.2.0
Release 6.1.0
Automatically generated after merging #233.
What's Changed
- Documentation update by @yashpatel6 in #223
- Add sanitization to allow special characters such as underscores in IDs by @yashpatel6 in #225
- Add release management workflows by @nwiltsie in #229
- Update cluster reference paths by @nwiltsie in #230
- Add nextflow.config to release management process by @nwiltsie in #231
- Adding additional test cases by @yashpatel6 in #226
- Prepare for version
6.1.0by @boutros-lab-infrastructure-owner in #233
New Contributors
- @boutros-lab-infrastructure-owner made their first contribution in #233
Full Changelog: v6.0.0...v6.1.0
metapipeline-DNA v6.0.0
What's Changed
- Update dependabot to group common submodules by @nwiltsie in #218
- Pipeline version updates by @yashpatel6 in #220
- Release
v6.0.0by @yashpatel6 in #221
Full Changelog: v6.0.0-rc.6...v6.0.0
metapipeline-DNA v6.0.0-rc.6
What's Changed
- Capture and consolidate detailed logs for each sample by @nwiltsie in #206
- CSV support by @yashpatel6 in #210
- Fix validation bug by @yashpatel6 in #213
- Add optional
status_email_addressparameter for child pipeline updates by @nwiltsie in #214 - Release 6.0.0-rc.6 by @yashpatel6 in #217
Full Changelog: v6.0.0-rc.5...v6.0.0-rc.6
metapipeline-DNA v6.0.0-rc.5
What's Changed
- Add call-SRC with support for multiple combinations by @yashpatel6 in #204
- Fix WGS submission by @yashpatel6 in #209
Full Changelog: v6.0.0-rc.4...v6.0.0-rc.5