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@dependabot dependabot bot commented on behalf of github Apr 7, 2025

Bumps the pipeline-submodules group with 1 update in the / directory: external/pipeline-Nextflow-module.

Updates external/pipeline-Nextflow-module from ef40c10 to 12f28e4

Commits
  • 12f28e4 Add bcf2vcf module (#53)
  • de9adf9 Merge pull request #51 from uclahs-cds/kpash-reorganize-process-logs
  • cb51ede make sample directory
  • d647093 remove stray replace
  • 6189072 standardize by removing replace('_','-')
  • b1f2dce update process log naming standard to include workflow
  • 2413b40 Merge pull request #49 from uclahs-cds/kpash-fix-process-log
  • 3567f9a reorganize repo structure: create modules/SAMtools/* dir
  • cbb5661 update README
  • 67523dc rename enclosing directory to be more descriptive
  • Additional commits viewable in compare view

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@dependabot dependabot bot added dependencies Pull requests that update a dependency file submodules Pull requests that update Submodules code labels Apr 7, 2025
@dependabot dependabot bot requested a review from a team as a code owner April 7, 2025 20:59
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dependabot bot commented on behalf of github Jul 22, 2025

Dependabot tried to update this pull request, but something went wrong. We're looking into it, but in the meantime you can retry the update by commenting @dependabot rebase.

@dependabot dependabot bot force-pushed the dependabot/submodules/pipeline-submodules-559678aea6 branch from 8e45074 to d9fdaa7 Compare August 5, 2025 02:31
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@dependabot rebase

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dependabot bot commented on behalf of github Aug 5, 2025

Looks like this PR is already up-to-date with main! If you'd still like to recreate it from scratch, overwriting any edits, you can request @dependabot recreate.

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@dependabot recreate

@dependabot dependabot bot force-pushed the dependabot/submodules/pipeline-submodules-559678aea6 branch from d9fdaa7 to 43de53a Compare August 5, 2025 20:27
Bumps the pipeline-submodules group with 1 update in the / directory: [external/pipeline-Nextflow-module](https://github.com/uclahs-cds/pipeline-Nextflow-module).


Updates `external/pipeline-Nextflow-module` from `ef40c10` to `12f28e4`
- [Commits](uclahs-cds/pipeline-Nextflow-module@ef40c10...12f28e4)

---
updated-dependencies:
- dependency-name: external/pipeline-Nextflow-module
  dependency-version: 12f28e4ebfc3e0f9a327c6c0dabf620ed4efe573
  dependency-type: direct:production
  dependency-group: pipeline-submodules
...

Signed-off-by: dependabot[bot] <[email protected]>
@dependabot dependabot bot force-pushed the dependabot/submodules/pipeline-submodules-559678aea6 branch from 43de53a to cc0fb65 Compare August 19, 2025 06:18
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dependabot bot commented on behalf of github Sep 15, 2025

Dependabot tried to update this pull request, but something went wrong. We're looking into it, but in the meantime you can retry the update by commenting @dependabot rebase.

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