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Can compairr be used as a library, i.e. linked into another C++ program?

Status: Open.

#51 In uio-bmi/compairr;

· schristley opened on Apr 23, 2025

Allow >2 files as input (concatenate as 1 file)

enhancementNew feature or requestNew feature or request

Status: Open.

#50 In uio-bmi/compairr;

· LonnekeScheffer opened on Mar 4, 2025

Read junctions and trim off leading and trailing residues

enhancementNew feature or requestNew feature or request

Status: Open.

#49 In uio-bmi/compairr;

· torognes opened on Feb 28, 2025

Add matched_fraction scoring function

enhancementNew feature or requestNew feature or request

Status: Open.

#48 In uio-bmi/compairr;

· torognes opened on Feb 28, 2025

Add reverse ratio scoring function, update docs

enhancementNew feature or requestNew feature or request

Status: Open.

#47 In uio-bmi/compairr;

· torognes opened on Feb 28, 2025

Retain first sequence id when deduplicating

enhancementNew feature or requestNew feature or request

Status: Open.

#46 In uio-bmi/compairr;

· torognes opened on Feb 28, 2025

Allow the duplicate_count column to be missing

enhancementNew feature or requestNew feature or request

Status: Open.

#45 In uio-bmi/compairr;

· torognes opened on Feb 28, 2025

Allow multiple indels or more substitutions with a single indel

enhancementNew feature or requestNew feature or request

Status: Open.

#42 In uio-bmi/compairr;

· torognes opened on Apr 28, 2023

Allow partial V or J gene match

enhancementNew feature or requestNew feature or request

Status: Open.

#9 In uio-bmi/compairr;

· torognes opened on Apr 14, 2021

Distance 2 with indels

enhancementNew feature or requestNew feature or request

Status: Open.

#2 In uio-bmi/compairr;

· torognes opened on Apr 9, 2021