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Extend viv.pl "Failed to reset STDOUT" error message

enhancement

Status: Open.

Feature

#373 In wtsi-npg/p4;

· dozy opened on May 14, 2025

Review default values for parameter "markdup_optical_distance_value" in static parameters files (p4c)

Status: Open.

#361 In wtsi-npg/p4;

· dozy opened on Mar 10, 2025

Container needs adjustments for PATH so viv.pl and vtfp.pl are available

Status: Open.

#340 In wtsi-npg/p4;

· jmtcsngr opened on May 30, 2024

Container may need explicit export PERL5LIB

Status: Open.

#339 In wtsi-npg/p4;

· jmtcsngr opened on May 30, 2024

markdup_none assumes target alignment

Status: Open.

#301 In wtsi-npg/p4;

· dozy opened on Jun 30, 2022

No reference for samtools's benefit in stage 1

Status: Open.

#242 In wtsi-npg/p4;

· dkj opened on Jul 28, 2018

overspecified path for temporary files

Status: Open.

#166 In wtsi-npg/p4;

· dozy opened on Dec 20, 2016

multiple uses of -prune_nodes, -splice_nodes

Status: Open.

#165 In wtsi-npg/p4;

· dozy opened on Nov 30, 2016

Eval use of mbuffer in graphs

Status: Open.

#118 In wtsi-npg/p4;

· dkj opened on Oct 15, 2015