update_deps: Clone with --filter=tree:0 to decrease download size

[water-chika]

Use git clone --filter=tree:0 to clone deps.
This could decrease download size.

[ci-tester-lunarg]

Author water-chika not on autobuild list. Waiting for curator authorization before starting CI build.

[ci-tester-lunarg]

Author water-chika not on autobuild list. Waiting for curator authorization before starting CI build.

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