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Issues: GenomicsStandardsConsortium/mixs

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#639 opened Oct 17, 2023 by turbomam
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Issues list

update linkML with external links documentation-external For MIxS end users (website) website
#873 opened Nov 15, 2024 by only1chunts
2
All URL links in MIxS should be primarily captures in see_also lists
#863 opened Sep 23, 2024 by turbomam
never use name or text metaslots
#862 opened Sep 23, 2024 by turbomam
@turbomam
consistently use terse LinkML SimpleDict form whenever possible
#861 opened Sep 23, 2024 by turbomam
@turbomam
1
heavy_metals description and guidance is NOT LinkML appropriate
#860 opened Sep 19, 2024 by mslarae13
@mslarae13
1
URL/slinks that are embedded in string slots should be moved or at least copied to a curie/url slot
#859 opened Sep 17, 2024 by turbomam
OHE attributes with existing GSC validation
#858 opened Sep 10, 2024 by lschriml
2
Add structured_pattern constrain to env_local_scale, to match env_broad_scale and env_medium
#857 opened Sep 9, 2024 by turbomam
@turbomam
1
Term mismatch ENA / NCBI / MIxS
#853 opened Aug 21, 2024 by jjkoehorst
1
what are our options for diffing schema changes?
#845 opened Aug 14, 2024 by turbomam
@turbomam
1
I don't think permissible value URIs are being adequately escaped (from gen-owl)
#844 opened Aug 14, 2024 by turbomam
@cmungall @turbomam
2
do we ever want a LinkML setting to allow any number (including 0) of any characters?
#843 opened Aug 14, 2024 by turbomam
@turbomam
double check unit setting
#842 opened Aug 14, 2024 by turbomam
@turbomam
1
use consistent naming for anchor and URL for term table/term list
#841 opened Aug 14, 2024 by turbomam
@sujaypatil96
Human / Host / Animal sex (discussion) 3-CIG Issues that should be handled by the CIG
#838 opened Aug 14, 2024 by jjkoehorst
7
Give enumerations boilerplate definitions for now
#836 opened Aug 13, 2024 by turbomam
1
@turbomam
5
A table of release dates for each MIxS release should be prominently displayed on the MIxS repo landing page or a GSC web page
#835 opened Aug 12, 2024 by turbomam
@lschriml @only1chunts
4
Distinguishing LinkML/NMDC tasks and MIxS specific tasks 3-CIG Issues that should be handled by the CIG 4-TWG Issues that should be handled by the TWG
#832 opened Jul 19, 2024 by lschriml
2
chlorophyll slot is not associated with the Plant Extension!? low priority
#830 opened Jul 19, 2024 by turbomam
2
work in progress: YAML linting and auto-formatting super-issue
#823 opened Jul 16, 2024 by turbomam
@sujaypatil96
3
Add deprecation documentation to github docs 3-CIG Issues that should be handled by the CIG
#819 opened Jul 9, 2024 by mslarae13
1
make URL for deprecation.yaml id
#818 opened Jul 9, 2024 by mslarae13
@sujaypatil96 @mslarae13
1
16s master issue
#815 opened Jul 3, 2024 by turbomam
Some slots have non-standard names
#814 opened Jul 3, 2024 by turbomam
2
Schema elements should have descriptions
#813 opened Jul 3, 2024 by turbomam
1
4
ProTip! Exclude everything labeled bug with -label:bug.