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Update mtbseq to v.1.1.0 #42620

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Merged
merged 3 commits into from
Aug 24, 2023
Merged

Update mtbseq to v.1.1.0 #42620

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2599bec
update to v.1.1.0
cutpatel Aug 23, 2023
389156b
Merge branch 'master' into update_mtbseq
cutpatel Aug 23, 2023
97379dc
Update meta.yaml
rpetit3 Aug 23, 2023
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17 changes: 8 additions & 9 deletions recipes/mtbseq/meta.yaml
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Original file line number Diff line number Diff line change
@@ -1,13 +1,15 @@
{% set version = "1.1.0" %}

package:
name: mtbseq
version: "1.0.4"
version: {{ version }}

source:
url: https://github.com/ngs-fzb/MTBseq_source/archive/v{{ PKG_VERSION }}.zip
sha256: 21d5a8174a802e9b6a817a4f36149e586cb37ac6c40675e0314347c748457a3f
url: https://github.com/ngs-fzb/MTBseq_source/archive/v{{ version }}.zip
sha256: 6d0582ae44a180de78591e9c2dfa510afcb5f0ae0eeca1c049045b0c25c5594d

build:
number: 2
number: 0
noarch: generic

requirements:
Expand All @@ -21,19 +23,16 @@ requirements:
- perl-number-format
- perl-statistics-basic >=1.6611
- perl-mce >=1.836
- picard >=2.17.0
- picard >=2.17.0,<3

test:
commands:
- MTBseq --version >/dev/null
- MTBseq --help >/dev/null

- MTBseq --check >/dev/null

about:
home: https://github.com/ngs-fzb/MTBseq_source
license: GPLv3
license_file: GPL.md

summary: "Pipeline for WGS analysis of M. tuberculosis"
description: |
MTBseq is a semi-automated pipeline for mapping, variant calling and
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