Bundle support for FeatureInputs, references; add CreateBundle tool. #5483

Job	Run time
Validate generated WDLs using womtools	14m 3s
Validate script WDLs using womtools	1m 8s
build and push gatk docker to artifacts	12m 19s
check if the environment has privileges	1s
WDL test RUN_CNV_GERMLINE_COHORT_WDL on cromwell	24m 22s
WDL test RUN_CNV_GERMLINE_CASE_WDL on cromwell	26m 8s
WDL test RUN_CNV_SOMATIC_WDL on cromwell	24m 44s
WDL test RUN_M2_WDL on cromwell	17m 32s
WDL test RUN_VCF_SITE_LEVEL_FILTERING_WDL on cromwell	12m 42s
cloud build and test Java 17.0.6+10	20m 13s
integration build and test Java 17.0.6+10	28m 52s
unit build and test Java 17.0.6+10	18m 29s
integration test on docker Java 17.0.6+10	33m 16s
unit test on docker Java 17.0.6+10	19m 34s
variantcalling test on docker Java 17.0.6+10	29m 12s
conda test on docker Java 17.0.6+10	25m 43s
	5h 8m 18s

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