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Bundle support for FeatureInputs, references; add CreateBundle tool. #5483

Bundle support for FeatureInputs, references; add CreateBundle tool.

Bundle support for FeatureInputs, references; add CreateBundle tool. #5483

Triggered via pull request June 9, 2025 14:16
Status Success
Total duration 46m 5s
Artifacts 8

gatk-tests.yml

on: pull_request
check if the environment has privileges
0s
check if the environment has privileges
build and push gatk docker to artifacts
12m 19s
build and push gatk docker to artifacts
Validate script WDLs using womtools
1m 8s
Validate script WDLs using womtools
Validate generated WDLs using womtools
14m 3s
Validate generated WDLs using womtools
Matrix: wdlTests
Matrix: test
Matrix: testOnDocker
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Annotations

7 errors and 2 warnings
unit build and test Java 17.0.6+10
The v0 series of google-github-actions/auth is no longer maintained. It will not receive updates, improvements, or security patches. Please upgrade to the latest supported versions: https://github.com/google-github-actions/auth
cloud build and test Java 17.0.6+10
The v0 series of google-github-actions/auth is no longer maintained. It will not receive updates, improvements, or security patches. Please upgrade to the latest supported versions: https://github.com/google-github-actions/auth
integration build and test Java 17.0.6+10
The v0 series of google-github-actions/auth is no longer maintained. It will not receive updates, improvements, or security patches. Please upgrade to the latest supported versions: https://github.com/google-github-actions/auth
unit test on docker Java 17.0.6+10
The v0 series of google-github-actions/auth is no longer maintained. It will not receive updates, improvements, or security patches. Please upgrade to the latest supported versions: https://github.com/google-github-actions/auth
conda test on docker Java 17.0.6+10
The v0 series of google-github-actions/auth is no longer maintained. It will not receive updates, improvements, or security patches. Please upgrade to the latest supported versions: https://github.com/google-github-actions/auth
variantcalling test on docker Java 17.0.6+10
The v0 series of google-github-actions/auth is no longer maintained. It will not receive updates, improvements, or security patches. Please upgrade to the latest supported versions: https://github.com/google-github-actions/auth
integration test on docker Java 17.0.6+10
The v0 series of google-github-actions/auth is no longer maintained. It will not receive updates, improvements, or security patches. Please upgrade to the latest supported versions: https://github.com/google-github-actions/auth
WDL test RUN_VCF_SITE_LEVEL_FILTERING_WDL on cromwell
Error: Path Validation Error: Path(s) specified in the action for caching do(es) not exist, hence no cache is being saved.
WDL test RUN_CNV_GERMLINE_CASE_WDL on cromwell
Error: Path Validation Error: Path(s) specified in the action for caching do(es) not exist, hence no cache is being saved.

Artifacts

Produced during runtime
Name Size Digest
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test-results-17.0.6+10-cloud Expired
82.4 KB
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test-results-17.0.6+10-integration Expired
586 KB
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test-results-17.0.6+10-unit Expired
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test-results-docker-17.0.6+10-conda Expired
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test-results-docker-17.0.6+10-integration Expired
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test-results-docker-17.0.6+10-unit Expired
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test-results-docker-17.0.6+10-variantcalling Expired
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