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dependency_submission.yml
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Fix index outputs from PrintSVEvidence and CollectSVEvidence (#9269) Dependency Submission #56: Commit 5ed95a2 pushed by mwalker174
1m 59s master
master
1m 59s
Add command line option to HaplotypeCaller for upweighting ALT-suppor… Dependency Submission #55: Commit 2a1f41b pushed by kachulis
1m 19s master
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Updated GKL version to 0.9.1 (#9220) Dependency Submission #54: Commit 342c5ca pushed by jonn-smith
1m 15s master
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Adds a tool for converting a counts type file to a depth type file. (… Dependency Submission #53: Commit 725f9b0 pushed by VJalili
1m 24s master
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Improve handling of intersecting groups in SVStratify (#9185) Dependency Submission #52: Commit 51797aa pushed by mwalker174
50s master
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More fixes to MANE transcript selection mode (#9226) Dependency Submission #51: Commit 845fa58 pushed by kockan
1m 22s master
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1m 22s
DDO-4137 update to read artifacts from GAR (#9198) Dependency Submission #50: Commit 180a5bc pushed by cmnbroad
1m 21s master
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Final htsjdk update (#9216) Dependency Submission #49: Commit 312bd36 pushed by jonn-smith
1m 13s master
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1m 13s
Fix Funcotator transcript override functionality (#9214) Dependency Submission #48: Commit 2c08b8e pushed by kockan
1m 38s master
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Bump commons-beanutils:commons-beanutils from 1.9.4 to 1.11.0 (#9201) Dependency Submission #47: Commit 4b94676 pushed by lbergelson
1m 10s master
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Extend somatic support in GenotypeGVCFs to use DRAGEN SQ (#9188) Dependency Submission #46: Commit f6371f0 pushed by ldgauthier
1m 48s master
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Updated the GKL to include an optimized implementation of the DRAGEN … Dependency Submission #45: Commit c628b65 pushed by jamesemery
1m 29s master
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Update CI job matrix names so the interesting bits appear in the dash… Dependency Submission #44: Commit 6fde314 pushed by cmnbroad
1m 11s master
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Modified docker to be staged so we can also build a version without t… Dependency Submission #43: Commit f3ee9d8 pushed by KevinCLydon
49s master
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Sort CPX intervals by position in SVAnnotate (#9175) Dependency Submission #42: Commit 1facd91 pushed by epiercehoffman
1m 25s master
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Do not strip ECN fields from truth records in SVConcordance (#9161) Dependency Submission #41: Commit eddfa81 pushed by mwalker174
1m 30s master
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Fix funcotator links (#9159) Dependency Submission #40: Commit 3f6faa1 pushed by lbergelson
1m 19s master
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Add variant stratification and overlap metrics in SVConcordance (#9125) Dependency Submission #39: Commit 657b4ee pushed by mwalker174
1m 28s master
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Update Htsjdk and Picard (#9143) Dependency Submission #38: Commit 76edc75 pushed by lbergelson
1m 14s master
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Update parquet to 1.15.1 (#9144) Dependency Submission #37: Commit 531a1d5 pushed by lbergelson
1m 10s master
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Small changes to M2 WDL for Permutect (#9138) Dependency Submission #36: Commit ebd8a27 pushed by davidbenjamin
1m 6s master
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Optional blacklist VCF to for labeling artifacts in Permutect weak-la… Dependency Submission #35: Commit fdd4333 pushed by davidbenjamin
1m 26s master
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Bump org.apache.commons:commons-vfs2 from 2.9.0 to 2.10.0 (#9130) Dependency Submission #34: Commit 8a24668 pushed by lbergelson
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Update gradle sonatype plugin (#9133) Dependency Submission #33: Commit ebd5e27 pushed by lbergelson
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Updated references to the funcotator datasets bucket to point to the … Dependency Submission #32: Commit b07fa39 pushed by KevinCLydon
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